Anguilla anguilla (European eel): 118236137
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Entry
118236137 CDS
T07545
Symbol
smarcc1a
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118236137 (smarcc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aang03021
]
118236137 (smarcc1a)
03036 Chromosome and associated proteins [BR:
aang03036
]
118236137 (smarcc1a)
Transcription machinery [BR:
aang03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118236137 (smarcc1a)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118236137 (smarcc1a)
PBAF complex
118236137 (smarcc1a)
GBAF(ncBAF) complex
118236137 (smarcc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
118236137
NCBI-ProteinID:
XP_035290126
LinkDB
All DBs
Position
1:57460576..57483326
Genome browser
AA seq
1085 aa
AA seq
DB search
MATSASVTGGTGSSGQATGQAGSGPSVGRKKDGGPSSKYWESAETVSQLESVRLWIGKHY
KKYVQADSPSSKFLASLVVQLLQFQEDAFGRRVNNPALTKLPAKSFLDFKAGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMNVEKTLVQNNCLTRPIVYLVPEMEQKQANK
LKDIIKRHQGSITEDKSKATHHIYPSPAQSEEEEWLRPVMRKDKQVLVHWGMYPDSYDTW
VPASDVEADVEEPPNPEKPWKVHAKWVLDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPR
EEESSRTPDRKDRKAASGKKRRRSPSPPATPAESRKKGGKKGNPGPYWKRRGHREEEEPE
EDLTKDMEDPTPVPNMEEVTLPKNVNPKKDSENTPVKGGTVADLDEQEDDSMVSGGKEEE
EPGKAEVNRLMDSSEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSKTP
EIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDADSR
PLPMGPPPTPHFNVLADTPSGLVPLHHRPPQVPASQQMLSFPEKGKDKPSDLQNFGLRTD
IYSKKNPKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP
IEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRV
REEVPAELVEAHVKKVQEAARSTGKVDPAYGLESSGIAGTAPEEPEKTESSEGEKAETDG
ESQQADKAESKDEAEKPGESAERPAEGERPKTEPAEPADREEAESDGGEEAKTADKDREE
PMDTAEGPKEAEGEEGQKKLEHDVGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQ
MEQQQQQQQQQQQQAAAAAAQNPSVHLGHPAPGYPPMHHPMGPHHPPQTGPMGVPGQPMP
GRMMPGGPPVGQPQPNMPNMPNMPPMMGPRHPGAPNGMYTGPPPAQPDGMPPAPVGPPAP
RVAEN
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcggcaagtgtgacggggggaacgggttcaagcggacaagcgacggggcag
gcgggcagcggtccctcagttggtaggaagaaagatggtggtccgtcctcgaaatattgg
gagagcgcggagacagtctcccagttagagtcggttcgtctgtggatcggaaaacactac
aaaaagtatgtccaggctgactctccctccagcaaatttttggcaagcctggttgtccag
ctgctgcagttccaggaggatgctttcggcagaagagtcaacaacccagctctcaccaaa
ctgcctgcaaagagtttcctggacttcaaggcagggggggctctgtgccacatcctgggc
tctgcgtacaagttcaagagtgagcaaggctggcgccgctttgacctacagaacccctcc
aggatggacaggaatgttgagatgtttatgaatgtggagaagactttggtgcagaacaat
tgcctgacgcgaccaattgtgtatctggtccctgaaatggagcagaaacaggctaataag
ctgaaggacatcatcaagagacaccagggctccatcactgaggacaagtccaaggccaca
caccacatctacccttccccagcccagtcagaggaagaggagtggctccgcccagtcatg
cggaaggacaaacaggtgctggtgcactggggcatgtaccctgacagctatgacacatgg
gtgcctgccagtgatgtggaagcggatgtggaggagccgcccaacccagagaaaccgtgg
aaggttcatgccaagtgggtcctggacacagacgcttttaatgaatggatgaatgaggag
gactatgaagtggacgagaacaagaagccagtgagtttccgccagcgcatcttcccacgg
gaggaagagtcttcccgtacacccgatcgcaaggaccgcaaggccgcctcgggaaagaag
aggaggcgctcgccatcgcccccagcaacccctgcggagtcccgcaagaaggggggcaaa
aaggggaacccagggccgtactggaagcgccgaggccaccgagaggaggaggagccggag
gaggacctgaccaaggacatggaggaccccacaccggtccccaacatggaggaggtgacc
ctgcccaaaaacgtgaaccccaagaaggacagtgagaacactccggtgaagggcgggaca
gtggcggatctggatgaacaggaagatgactccatggtctcaggaggcaaggaggaagag
gaaccagggaaggcggaggtgaatcgcctgatggactccagtgaggacaatgtgacggag
caaacccatcacatcatcatccccagctacgccgcttggtttgactacaactgcatccac
gaaattgaaagacgagcactgccagagttcttcaatggaaagaataagtccaagactcca
gagatatacctggcctaccgaaacttcatgattgacacgtaccggctgaacccccaggag
tacctgacctccacgtcctgccgcaggaacctgacgggggacgtgtgcgctgtcatgaga
gtccacgccttcctggagcagtggggcctggtgaattaccaggtggacgctgacagcagg
cccctccccatggggcccccgcccactccccacttcaacgtgctggcggacacgccctcc
ggcctggtgcccctccaccaccgccccccacaggttccagcctcccagcagatgctcagc
ttcccagagaaaggcaaagacaagccatcggacctgcagaacttcggccttcgcacggac
atctactccaagaagaaccccaagagtaaaggtgcaagtgccggcagggagtggactgag
caggagactctgctgctactggaggccctggagatgtacaaggacgactggaacaaggtg
tcggagcacgtgggcagccgcacgcaggacgagtgcatcctgcactttctgcggctaccc
atcgaggacccgtacctggagaactcggacgcctcgctgggacccctggcctaccagccc
gtccccttcagccagtccggaaacccggtcatgagcaccgtggccttcttggcttctgtg
gttgacccgcgggtggctgccgccgctgccaaggctgcacttgaggagttctcgcgggtg
cgggaggaggtcccggcggagctggtggaggcgcacgtgaagaaggtgcaggaggcggcg
cgcagcacgggcaaagtggaccccgcctacggcctggagagcagcggcatcgccggcacc
gcccccgaagagcccgagaagacggagtcatcagagggggagaaggcggagaccgatggc
gagtcccagcaagctgacaaggccgagtccaaggacgaggcggagaagccaggcgagtcg
gccgagaggccggcggagggagagaggccgaaaaccgagcccgccgagccggcggaccga
gaagaggccgagagcgacggaggggaagaggccaaaaccgcagataaggaccgggaggag
cccatggacacggccgaaggccccaaggaggccgagggcgaggaaggccagaagaagctg
gagcacgacgtcggggaggggaacatcgccacggccgcggccgccgccctcgcgtccgcc
gccaccaaggccaagcacttggcagcagtggaggagaggaagatcaagtctctggtagcc
cttctggtggagacccaaatgaagaaactggagatcaaactcaggcacttcgaggagctg
gagaccatcatggaccgggagaaggaagcgctggagctgcagaggcagcagctgctgacg
gagcggcaggccttccacatggagcagctgaagtacgctgagatgaaggcccgccagcag
atggagcagcagcagcagcagcagcagcagcagcagcagcaggccgctgccgccgccgcc
cagaaccccagcgttcacctcggccaccccgcccccggatacccgcccatgcaccatccc
atgggcccgcaccaccccccacagacaggacccatgggagtccccggccagcctatgccc
gggcgcatgatgcccggtggaccgcccgtcgggcagccccaacccaacatgcccaacatg
cccaacatgccccccatgatgggaccccggcaccccggagcccccaacggcatgtacacc
ggccctccccctgcacagcctgatgggatgccacctgcccccgtgggacctccagcgccc
cgtgtggccgagaactaa
DBGET
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