Anguilla anguilla (European eel): 118236386
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Entry
118236386 CDS
T07545
Symbol
rad50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03440
Homologous recombination
aang03450
Non-homologous end-joining
aang04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118236386 (rad50)
03450 Non-homologous end-joining
118236386 (rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118236386 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aang03032
]
118236386 (rad50)
03400 DNA repair and recombination proteins [BR:
aang03400
]
118236386 (rad50)
DNA replication proteins [BR:
aang03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
118236386 (rad50)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
118236386 (rad50)
BRCA1-C complex
118236386 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
118236386 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
ABC_tran
AAA_29
AAA_13
AAA_22
AAA_16
DUF4748
Motif
Other DBs
NCBI-GeneID:
118236386
NCBI-ProteinID:
XP_035290601
LinkDB
All DBs
Position
9:complement(5164785..5195221)
Genome browser
AA seq
1313 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTVLVGPNGAGKTTIIECLKYITSGDFPPG
SKGNTFVHDPKDAHETEVRAQIRLQFRDVNGEQVMVQRSMQSTQKGKKTPEFKTLEGVIA
RVKHGEKVSLSSKCAEIDREMITALGVSKAVLNHVIFCHQEESNWPLSEGKALKQKFDEI
FSATRYIKVLETLRQLRLKQANTVKSCQVELRYLKQNKEKAQEIRDLLTAKEAQLAASRE
SVQRLEGQIEPLENRLMDIDNNLGKVMKLDNDIKALDSRKKQMEEDNRELEEKMEQVFQG
SDEQLQEMYQNHQRTVHEKERRLETCQRDTERAYRECQRLNRAKSELLMEQGRLQVQADR
QAQNVRNRDAHVKNLAAHLEMEGYERAPFSERQLRSFRQQVTERQDRETEAANQAMRDMQ
EKEATKQRGIDEIRDKKTGLERTVDLKRDLQQKRQQELRNVRGDLQQLEGSSARLQELEQ
ELAKAERELENAVQASDVDGLKAEVQELQTEKTRLDRAQRRLDQEMETLNAHTKTRTEMD
MLKKDKTDKEEQVRKIKSRHNEDLTSLLGHFPNKKQLEDWIHGKNREVNQTRDKLYKLSK
DLASAEQNKSHCSAEIRRKEQQLTSFEEQMFNVCGSQDFQSDLVKLQEDLEKCSKQRAML
AGATAVYTQFISQLTEEAEPCCPVCQRTFPAEAELQDVINDMQSKLRLVPDKLKNTEQDL
KRKERKRDEMMALKPIRQSLSELQERELPELRNKLQGVNRELERLKGDIEEQETMLSLLM
SEEETAKACLQDISLMDRYQLDLRDVEKKIAQQAARLQGVDLNRTVQQVNQEKQETQHRL
DTISSKMELKRKLIQDQQEQIQTLKSSVNETRAEKLQISSNMQRQQQLEEQCVEFSMEVQ
ALQREIQEAQEQLNPLAATLEKLQQEKEELIGRRKQKQEEGLEKVNAIKERLKNITVLEK
EIEKYIQEGKEEYKEQKEAELQETNSQLHEAEKQREKINKDIGNIRQDIDTQKVQERWLQ
DNLTLRKRMEELVEVCEKRKTLMKEMGDMQVLQLRNERREAERSLEELKKSRSVALGRQK
GFEEEILRFRKELREDQYGQAETHFRQKMIVMRTTELANKDLDIYYKALDQTIMKFHSMK
MEEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRTYNYRVVMVKGDTALDMRG
RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSKQ
RNFQLLIITHDEDFVELLCRSNYVEDFYRIRKNVEQCSQISKCSVATLNAYLH
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatcgagaagatgagcatcctcggggtgcgaagtttcggagtggaggataaa
gacaagcaagtcataacgttcttcagtccgttgacggtgctcgtggggccaaacggagcg
ggaaaaacgaccatcattgaatgtctgaagtacatcacatccggtgactttccacccgga
agtaaggggaacacctttgtccatgaccccaaggacgcccacgagacggaagtgcgcgcc
cagatccggctgcagttccgcgacgttaacggcgagcaggtgatggtccagcggtccatg
cagagcacgcagaagggcaagaagacaccagagttcaagaccctggaaggggtgatcgcc
agggtgaagcatggggagaaggtgagcctgagctccaaatgtgcggagatcgaccgcgag
atgatcacggcgctgggcgtgtccaaggccgtcctcaaccacgtcatcttctgccaccag
gaggagtccaactggccactcagcgagggcaaggcgctcaagcagaagttcgatgagatc
ttctcagccacaaggtacatcaaagtcctggagactctgcgccagctcaggctgaagcag
gccaacaccgtcaagagctgccaggtggagctgaggtacctgaagcagaacaaggagaag
gcccaggagatccgggacctgctgaccgccaaggaggcccagctggccgcctcgagggag
agcgtgcagcgcctcgagggccagatcgagcccctggagaaccgtttgatggacatcgat
aataacctgggtaaggtgatgaagctggataacgacatcaaggccctggacagcaggaag
aagcagatggaggaggacaatcgggagctggaggagaagatggagcaggtgttccagggc
tcggacgagcagctgcaggagatgtaccagaaccaccagcgcaccgtgcacgagaaggag
cgtcgcctggagacgtgccagcgcgacacggagcgggcgtaccgggagtgccagcggctc
aaccgcgccaagtccgagctgctgatggagcagggccgcctccaggtccaggccgaccgg
caggcccagaacgtgaggaaccgggacgcgcacgtgaagaacctggcggcgcacctggag
atggaggggtacgagcgcgcccccttcagcgagcgccagctccggagcttccgccagcag
gtgacggagaggcaggaccgcgagaccgaggccgccaaccaggccatgagagacatgcag
gagaaggaggcgacgaagcagcggggcatcgacgagattcgggacaagaagacgggcctg
gagcgcacggtggatctgaagagggacctgcagcagaagcggcagcaggagctcaggaac
gtgcgcggggacctgcagcagctcgagggctcgtccgcccgcctgcaggagctggagcag
gagctggccaaagcggagcgggagctggagaacgcggtgcaggcctcagacgtggacggc
ctgaaggccgaggtgcaggagctgcagacggagaagacgcggctggaccgcgcccaacgc
aggctggaccaggagatggagacgctcaacgcccacaccaagacccgcaccgagatggac
atgctgaagaaggacaagacggataaggaagaacaggtgcggaaaatcaagtccaggcac
aatgaggacctgacgtccctcctggggcacttccccaacaagaagcagctggaggactgg
atccacggcaagaaccgggaggttaaccagaccagagacaagctctacaaactcagtaag
gacctggcctcagccgagcagaataagagtcactgcagcgcggagatccggcggaaggag
cagcagctgaccagcttcgaggagcagatgttcaacgtgtgtggcagccaggacttccag
tccgatctggtcaagctgcaggaggacctggagaagtgctccaagcagagggccatgttg
gcgggagccacggcggtctacacccagttcatcagccagctgacggaggaggcggagccg
tgctgccccgtctgccagcgcaccttccccgcggaggcggagctacaggacgtcatcaac
gacatgcagtccaagctccgcctcgtccccgacaagctgaagaacaccgagcaggacctg
aagaggaaggagcggaagcgggacgagatgatggccctcaagccaatcaggcagtccctg
tccgagctccaggagcgagagctaccggaactgcggaacaagctgcagggcgtcaaccgg
gagctggagaggctgaagggggacatcgaggagcaggagaccatgctgtccctgctcatg
tccgaggaggagacggccaaggcctgcctgcaggacatctccctgatggacaggtaccag
ctggacctcagggacgtggagaagaagatcgcccagcaggcggcccggctccagggggtg
gacctgaaccgaaccgtgcagcaggtgaaccaggagaagcaggagacccagcaccggctg
gacaccatttccagtaagatggagctgaagaggaagctgatccaggaccagcaggagcag
atccagacgctgaagagctccgtgaatgagaccagggctgagaagctgcagatctccagc
aacatgcagcggcagcagcagctggaggagcagtgtgtggagttctctatggaggtccag
gccctgcagcgtgagatccaggaagcccaggagcagctgaaccccctggctgccaccctg
gagaagcttcagcaggagaaggaggagctgattggccgacggaaacagaagcaggaggag
gggcttgagaaggttaatgccattaaggagaggctcaagaacataactgtcctggagaaa
gagatcgagaagtacatccaagaggggaaagaagagtacaaagagcaaaaggaggcggag
cttcaggagacgaacagccagctccacgaggccgagaagcagcgggagaagatcaacaag
gacatcgggaacatcaggcaggacatcgacacgcagaaggtccaggagcgctggctgcag
gacaatctgacgctgaggaagaggatggaggagctggtggaagtgtgcgagaagaggaag
accctaatgaaggagatgggggacatgcaggtcctgcagctgagaaacgagcgcagggag
gcggagcggagcctggaggagctgaagaagagccgcagcgtggcgctggggaggcagaag
ggcttcgaggaggagatcctgcgcttccggaaggagctgcgcgaggaccagtacggccag
gccgagacgcacttccgccagaagatgatcgtcatgaggaccaccgagctggccaacaag
gacctggacatctactacaaggccctcgaccaaaccataatgaagtttcacagcatgaag
atggaggagatcaacaagatcatccgcgacctgtggcgcagcacctacagggggcaagac
atcgagtacgtggagatccgctccgacgtggacgagaacgcctcggccggcgtgaagagg
aggacgtacaactaccgcgtggtgatggtgaagggcgacacggcgctggacatgcggggg
cgctgcagcgcgggacagaaggtgctggcgtccctcatcatccgattggccctcgccgag
accttctgtctgaactgtggcattctggccctggatgagcccaccaccaacctggaccgg
gagaacatcgagtcactggctcacgctctggtggaaatcatcaagagccgctccaaacag
cgcaacttccagctcctcatcatcacgcacgacgaagacttcgtggagctcctgtgccga
tccaactacgtggaggacttctacaggatcaggaagaacgtggagcagtgctcgcagatc
tcaaagtgcagcgtggccacgctcaacgcttacctgcactga
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integrated database retrieval system
