Anguilla anguilla (European eel): 118237317
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Entry
118237317 CDS
T07545
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118237317 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118237317 (lsm1)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118237317 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
118237317 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF5321
Motif
Other DBs
NCBI-GeneID:
118237317
NCBI-ProteinID:
XP_035291782
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All DBs
Position
10:8284758..8286983
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFIVRGENVVLLGEIDLEKECDTVLQQVSIEEILEEQRAQQQAKQEAEKTKLQALKDR
GLTVPRTDMLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccggggacagctagcctcatcgaggatatcgacaaaaaacaccttgtc
cttctccgagacggaagaacgttgattgggtttcttagaagtattgaccagtttgcgaat
ctagtattacatcagactgttgaacgcatccatgtcggcaagaagtacggggacattccc
agaggaattttcattgtgagaggagagaacgttgtcttgcttggagaaatagacctggag
aaagaatgtgacacagttctacagcaggtgtccattgaggaaatcttggaagagcaacgg
gcacaacagcaagccaaacaggaggcagagaagaccaagctgcaggccctgaaagaccgg
ggactgaccgttcccaggacagacatgttggacgaatactga
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integrated database retrieval system
