Aquirufa antheringensis: G9X63_06350
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Entry
G9X63_06350 CDS
T08298
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aanh
Aquirufa antheringensis
Pathway
aanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9X63_06350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aanh03019
]
G9X63_06350
03400 DNA repair and recombination proteins [BR:
aanh03400
]
G9X63_06350
Enzymes [BR:
aanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G9X63_06350
Messenger RNA biogenesis [BR:
aanh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G9X63_06350
DNA repair and recombination proteins [BR:
aanh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G9X63_06350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
USQ03746
LinkDB
All DBs
Position
complement(1388315..1390630)
Genome browser
AA seq
771 aa
AA seq
DB search
MPHPITIDSLKEQLKKTFGFSQFRGEQEAIILNTVQGKNSFVLMPTGAGKSLCYQLPAIV
MEGTAIVISPLIALMKNQVDQMLAFGINAQFLNSSLTRAEINRVKAEVISGAVKLLYIAP
ESLNKQENLNFLKQAKISFVAIDEAHCISEWGHDFRPEYRKIRTIIETIDEKMPIIALTA
TATPKVQIDIQKTLNLEDATVFKSSFNRKNLYYEIRSKKDIDKQLIRFIKSHNGKAGIIY
CLSRKRVEEIAELLHVNSVKALPYHAGLEPQVRMANQEAFLNEEVDVMVATIAFGMGIDK
PDVRFVIHYDAPKSLEGYYQETGRAGRDGLDGTCILFYTYDDILKLDKFNKDKAVTEKEN
AKILLSEMVYYTNLGVCRRKQLLHYFGEHMAENCGFCDNCMHPTPTFKAEEEVSLVLKAV
QQTGEQFDAEHIADFLEGKSNSFIASHEQEKLSLFGAGKTVSWIAPEVDEEDDEDEDEDG
DEDTPKKPKMRKTPSKPVPIEDEKSPWISFIKQMSIFGLLEKDIENYGVLRLSEAGQAFL
KESFPITFYKDHDYEKEAEPAENEDEGAALGAKAYDDALFDLLKTLRKKIAKEKNLPPYV
IFQDPSLEEMATTYPTTQDEMAQINGVGMGKVVKFGKPFLDVINRYVEENEIETAKEVVV
KSTVNKSKIKIYIIQQVDRKIDLDLIAEQKEVSMAELIEEIETICFSGTKLNLDYYINQV
MELDKQEEIYEYFMSADTDDIAEALDTCDIEDVTEEELRLMRIKFLSELAN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgccccatccaattacgatcgatagcttaaaggaacagctaaaaaaaacctttggattt
agccaatttcggggtgaacaagaagccattattctaaataccgttcaaggaaagaatagt
ttcgttctgatgcctactggggcaggcaaatcgctttgctatcaattaccggcgattgta
atggagggaacagcgattgtcatctcgcctttgatcgcattgatgaagaatcaggtagat
caaatgttggcttttggcataaatgcccaattcttaaattcctctttaacccgcgcggaa
atcaaccgggtaaaggccgaagtgatctctggagccgtgaaattattgtacatcgccccg
gaatcactgaataaacaagagaacctgaacttcttaaaacaggctaaaatctccttcgtc
gcgatcgacgaggcacattgtatctctgaatgggggcacgattttagaccagaataccga
aaaatacgtaccatcatcgagaccatcgatgagaagatgcccatcatcgctttaacggcg
acggcaactcctaaggtgcaaattgatatccaaaagaccttaaatctggaagatgcgacc
gtttttaaatcctctttcaaccgcaaaaatctctactacgagatccgctcgaagaaagat
atcgacaagcaattaatccgtttcattaagtcgcataacggcaaagcggggattatttat
tgcctttcgagaaagcgcgtcgaggaaattgcggaattattacacgtgaatagcgtgaag
gcgcttccttaccacgctggtttagagccgcaggtacgcatggcgaaccaagaagctttc
ttgaatgaggaagtggacgtgatggtggcgacgattgcttttggaatgggaatcgataaa
ccagatgtgcgttttgtgattcactacgacgctcctaagtcattagagggatattaccaa
gaaacaggtcgtgccggtcgtgatggcttggatggaacatgtatcttgttctatacctac
gatgacatattgaaattagataagtttaataaagataaggccgtaacagagaaggagaat
gcgaaaattctcttgtctgaaatggtgtactatacgaatttaggtgtttgccgtcgcaag
caattgcttcactattttggggagcatatggctgaaaactgcggtttctgcgacaattgt
atgcatcctacccctacgtttaaagcggaagaggaggttagccttgtgttgaaagcagtg
cagcaaactggcgaacaattcgacgcagagcatatcgcagatttcttagagggcaaatcg
aattcttttattgccagccacgaacaggagaaattatctctgtttggtgcaggaaaaacg
gtttcttggattgctcctgaggtagacgaagaggatgatgaggacgaggatgaagacgga
gacgaggatacgcctaaaaaaccgaagatgcgcaaaacgccatcaaagccggtgcctatc
gaagatgaaaagtccccttggatctcctttatcaagcaaatgtccatttttggtctgcta
gaaaaagacattgagaattatggtgtactacgtttaagtgaggctggacaggctttcttg
aaggaatccttcccgattacgttctacaaagaccacgattacgaaaaagaagcggagccc
gctgaaaatgaagatgagggagctgctttaggggccaaagcctatgatgacgccctcttt
gacctacttaaaaccctccgcaagaagatcgcgaaggagaaaaatttgcctccgtatgtg
attttccaagatccttctttggaagaaatggcgaccacttatccgactacacaggatgaa
atggcccaaatcaacggcgtgggaatgggtaaagtcgtgaaattcggcaagccattcctg
gatgtgatcaatcgctacgtggaagaaaacgagatcgagacggcgaaagaggtagtcgtg
aaatcgaccgtcaacaagtcaaaaatcaagatttatatcatccaacaggtcgatcgcaaa
atcgatttagacctgatcgctgagcaaaaagaagtgagcatggcggaattgatcgaagag
atcgagaccatctgcttctcaggtacgaagctgaacctggattattacatcaatcaggtg
atggaactagacaaacaagaggaaatatacgaatacttcatgtctgcggacacggatgac
atcgcagaggccttggatacgtgtgatattgaagatgtaacggaggaagaacttcgttta
atgcgcattaaatttttaagtgaattagccaattaa
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