Aquirufa antheringensis: G9X63_08835
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Entry
G9X63_08835 CDS
T08298
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aanh
Aquirufa antheringensis
Pathway
aanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9X63_08835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aanh03019
]
G9X63_08835
Enzymes [BR:
aanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G9X63_08835
Messenger RNA biogenesis [BR:
aanh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G9X63_08835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
P-loop_SecA
DUF4043
ERCC3_RAD25_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
USQ04209
LinkDB
All DBs
Position
1968319..1969620
Genome browser
AA seq
433 aa
AA seq
DB search
MSFESLHLIEPILKALKEEGYTNPTPIQAQSIPIVLRGTDLLGCAQTGTGKTAAFTLPII
QLLEENKSFQKNKKIRALIVTPTRELAIQIGESFRAYARHTDLKYAVIFGGVGQSPQVSA
IRSGADVVIATPGRLLDLMNQRLLSIADVEYFVLDEADRMLDMGFIHDVKKLLAALPHKR
QSLFFSATMPPEIVKLAGSILKNPASVSVTPVSSTVEIINQSVYFVDKGNKNDLLLDILQ
DTSIKTALVFTRTKHGADKVVKMLLKASIKAEAIHGNKSQNARQTALKNFKAQTTRVLVA
TDIAARGIDIDELEFVINYELSNIAETYVHRIGRTGRAGAKGAAISFCDIEEKAYLKDIE
KLIGKKIPVVEAHKYPMKVLHVEKAAKKPQGQSRNGGGSRPGAPAAAAKDAKPARSFDKA
SSGRKWYGKKNTY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaatcattgcacctcattgagcctattttaaaggcgctcaaagaagagggt
tataccaatcctacccctattcaagcccaatcaatccctattgtccttcgtggcacagat
ttattaggttgcgcccaaacgggtacgggtaaaacagcagcgtttacgttgcccattata
caacttttggaagagaacaaatcgttccaaaaaaataagaaaatccgcgccttaatcgta
acgcccacacgggagttagcgattcagattggtgaaagttttagagcgtatgcgcgtcat
acggacttgaaatatgcggttatttttggaggagtgggccaaagtccccaagtctcagcc
atccgcagcggtgctgatgtggtgattgcgacgcctggacgtcttttggacctcatgaac
caacgccttttatcgatcgcagatgtggaatatttcgtcttagatgaggcggatcgcatg
ctcgatatgggtttcattcacgacgtgaagaaattattagcggccttgccacacaaacgc
cagtcgttattcttctcagcaacgatgccaccagaaatcgtgaaactagcgggaagtatt
ttgaaaaacccggcttctgtttccgttacaccggtttcctctaccgttgagatcattaat
cagtcagtctatttcgtagacaaaggaaataagaacgatcttttgcttgatatcttacaa
gatacgtcgattaaaacagccctagtcttcacccgtactaaacacggcgcggacaaagtg
gttaaaatgcttttaaaggctagcatcaaggctgaagcgattcacgggaataagtcccaa
aacgcccgccaaacagcgctgaaaaacttcaaagcacaaacaacgcgtgttcttgttgct
accgacatcgccgctcgtggtattgatatcgacgaattagaatttgtcattaattacgaa
ttatccaacatcgctgaaacctacgttcaccgtatcggtcgtaccggtcgtgcaggtgcg
aaaggggctgcgatttcgttttgcgatatcgaggagaaagcgtatttgaaagacatcgag
aaattaattgggaagaagattccagtagtggaagcgcataaatacccaatgaaagtcttg
cacgtggagaaagcggccaaaaaaccgcaaggtcaatcgcgtaatggcggtggttctcgt
ccgggtgctccagcagctgcagctaaagatgccaagccagctcgttctttcgataaggca
agttctggccgtaaatggtacggaaagaaaaatacctattga
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