Aquirufa antheringensis: G9X63_09735
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Entry
G9X63_09735 CDS
T08298
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aanh
Aquirufa antheringensis
Brite
KEGG Orthology (KO) [BR:
aanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aanh03009
]
G9X63_09735 (rlmD)
Enzymes [BR:
aanh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
G9X63_09735 (rlmD)
Ribosome biogenesis [BR:
aanh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G9X63_09735 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
PrmA
Methyltransf_15
Methyltransf_ANTKMT
FtsJ
PCMT
Methyltransf_37
UPF0020
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
USQ04378
LinkDB
All DBs
Position
2161188..2162609
Genome browser
AA seq
473 aa
AA seq
DB search
MSQKKEKKAPVVLEQIAILDFAAEAKCIAKVNEEVIFVQGAVAPGDIADLRILKSKKSFK
QAQAINIQPLSKHRTDVACSHFGICGGCKWQHVSYEAQTAFKAQQVKDNLIRIAKVKLPD
FQPILGSEETYYYRNKLEFTFSCARWLTEDEIGKEDLGSMNALGFHVPGRFDKILPVDHC
YLQPDPSNAIRNGVRDFAEANGISYYELKNQKEGALRNLIIRNTVTNEWMITVQFAYATE
EEIKSVMEYLKSTFPMITSLNYVVNQKGNDTFHDLDVVCYHGKPFMVEIMEDLKFQIGPK
SFFQTNAKQALKLYQLVREYADLQGNEVVYDLYTGTGTIGLFLAKHASKVVGLEYVEMAV
EDARINAELNGIKNATFFAGDMKKVLTEEFIAIHGAPDVIITDPPRAGMDLDVVNQILAV
KPKKIVYVSCNPATQARDLALLDVSYEVDVVHPVDMFPQTHHVENIVRLKLRA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaaaaagaaaagaaagccccagtggtgttggaacaaattgccattttggat
tttgccgctgaggcaaagtgtattgccaaagtgaatgaggaagtgatttttgttcaaggt
gctgtcgctcctggcgatatcgctgatttacgtatattgaagtccaaaaaaagcttcaaa
caagcccaagccatcaatatacagccactttctaaacaccgtacagacgtagcctgtagc
cattttggcatttgtggcggttgtaagtggcaacacgtttcttacgaagctcaaaccgcc
tttaaagcgcaacaagtcaaagataatttgatccgcatcgctaaagtgaaattgcccgat
tttcaaccgattctaggttctgaggagacctattactaccgcaataaattagaattcacc
ttttcttgtgcccgctggctgacggaagatgaaatcggtaaagaagatttaggatcgatg
aatgccttgggattccatgttccaggccgttttgataagattttgcccgttgatcattgc
tatttgcaacctgatccatccaatgcgattcgcaatggagtgcgtgatttcgctgaagcg
aatggtatctcctattatgaattaaagaatcaaaaagaaggtgctttacgtaatttaatt
atccgaaatacggttacaaacgaatggatgatcaccgtccagtttgcctatgccacagaa
gaggaaataaaatcagtcatggagtatttgaagtcaacattcccgatgatcacctctttg
aattatgtggtgaatcaaaaaggaaatgacacttttcatgatttagacgtagtttgctac
catggaaaaccttttatggtagaaataatggaagatttgaagttccaaattggacctaaa
tcattctttcaaacgaatgctaaacaagcgctcaagctataccaactagtgcgtgaatac
gctgatttgcaaggaaatgaagttgtttacgacttgtatacgggtacaggaactattggt
ttgtttttagcgaaacacgcgtctaaagttgttggactcgaatacgttgagatggccgta
gaagatgcacgtattaatgccgaattaaatggtatcaagaatgcaaccttctttgccggc
gatatgaagaaggttttgacagaagaatttattgctattcacggcgctccagatgtcatt
attaccgatcctcctcgtgcaggaatggatttagatgtagtgaatcaaattttggcagtc
aaaccgaagaaaatcgtatatgtctcgtgtaatcctgctacccaagcccgcgatttagcc
ttattagatgtttcttatgaagtggatgtagttcatccggtggatatgttcccgcagacg
caccatgtggagaatattgtgaggttgaaattaagagcatag
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