Aquirufa antheringensis: G9X63_09930
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Entry
G9X63_09930 CDS
T08298
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aanh
Aquirufa antheringensis
Pathway
aanh03030
DNA replication
aanh03430
Mismatch repair
aanh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G9X63_09930 (dnaE)
03430 Mismatch repair
G9X63_09930 (dnaE)
03440 Homologous recombination
G9X63_09930 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aanh03032
]
G9X63_09930 (dnaE)
03400 DNA repair and recombination proteins [BR:
aanh03400
]
G9X63_09930 (dnaE)
Enzymes [BR:
aanh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G9X63_09930 (dnaE)
DNA replication proteins [BR:
aanh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G9X63_09930 (dnaE)
DNA repair and recombination proteins [BR:
aanh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G9X63_09930 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
USQ04415
LinkDB
All DBs
Position
2196964..2200530
Genome browser
AA seq
1188 aa
AA seq
DB search
MQFSHLHNHSQFSLLDGASKISSMFKKAKADNMPAVAITDHGNMFGVFQFVAEAGKQGVK
PIVGCEFYLVNDRHKQVFTKELKDKRYHQLFLAKNPEGYQNLVKLCSLGFMEGMYSKYPR
IDKELVLKYHKGLIATTCCLGASVPQAILRDGEEAAEKEFKWWLDLFGEDYYIEVQNHFI
PEQQTVNEVLLRFAKKYNVKVIASNDSHYLDQKDANAHDILLCINTGEKQATPTYKDIEG
DFDMKGKRFAFYNDQFYFKTTEEMTKLWSHVPEAIDNTNEIVGKVETLKLTKDVMLPNFQ
IPSTFLSQDDYLEHITMEGAKKRYIDIDQVVEERLRFELHTIRTMGFAGYFLIVADFISA
GRDLGVYVGPGRGSAAGSVVAYCLGITNIDPIKYNLLFERFLNPDRKSLPDIDTDFDDEG
RQKVIDYVVDKYGKNQVAHIATYGTMAAKMSIKDVSRVLDLPLQESNALAKLVPEKPKIT
LDRIFNAALTGDKSLADKEGLNPEELEQVKELRRIKEAGGLPATVIENALILEGSVRGTG
IHAAGIIIAPSDLTDILPVATSKDVSLLITQYDGSVIENAGVIKMDFLGLKTLSILKEAV
RLIKQNHNETIILDDLPLDDKTTYELYQRAETNGTFQFESPGMQKHLRDLKPDQFSDLIA
MNALFRPGPMVYIPNYIARKHGREKIEYDLPEMEEYLSDTYGITVYQEQVMLLSQKLANF
TKGDADVLRKAMGKKDKATIDKMKGKFMEGGAANNHPVDKLDKIWTDWEAFAQYAFNKSH
STCYGLVAYQTGYLKANYPPEFMAAVLSNSLGNIEKITFFMDECKRMGLSLLVPDVNESS
RSFAVNKKGQIRFGLGAIKGVGDAAVDAIVEERQKNGEYKDIFDFVSRINVRQVNKKSLE
SLALAGAFDCFTEVARSHYFAIDSQDNTNFIEKIVRYSSRMAELKAEATASLFGELGAGT
GNDIAQPKIPTAEPWSVMEQLKNEKEVVGVYISGHPLDEYKTEIANFCNSNTGQLELRPN
VAQTFAGIVTKVNVRTSANGNQFMIFTIEDYAGNYEFALFSKDYIQFERFIAQDRLLFIN
GSYQLKNRHMDQMVFKIQSIELLSEILSDRTKEIKLRLDLNRLTPALLDLLQETLERNKG
DKKLTLEVYDEHEKIGMDFLSRKMQVCIGKGLISELKELENVGFKLIS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcgcatttgcacaaccattcccagttttccctcttagatggtgcgtctaag
atttcgtctatgttcaaaaaggcgaaagcagataatatgcccgctgtcgcgattacggat
cacgggaatatgtttggggtatttcagtttgtggctgaagccggaaagcaaggggtgaaa
ccgattgtgggctgtgagttttatttagtgaatgatcgccacaagcaggtttttacgaaa
gagttaaaggataagcgctatcaccaattgttcttagcgaagaatccagaaggctaccag
aatttggtcaaattatgttctttaggcttcatggaggggatgtattccaaatatcctcgg
attgataaggagctcgttttaaaataccacaaaggcctaatcgccacgacttgttgttta
ggggcctctgtgccacaagcgattttgcgcgatggcgaggaagcggcggagaaggaattt
aagtggtggttggatttgtttggcgaagattattacatcgaagtacaaaatcactttatt
ccagagcagcagacggtgaatgaagtcttgttgcgttttgcgaagaagtataatgtgaag
gtgattgcgtcgaatgatagccattatttggaccaaaaagatgccaacgcacacgatatt
ctattatgtattaatacgggcgaaaagcaggctactcctacttacaaggatattgaaggt
gattttgatatgaaaggaaagcgctttgctttctataatgatcaattttacttcaagacg
acagaggaaatgaccaaactttggtcgcatgtacctgaggcgattgataatacgaatgag
attgtgggcaaagtggagacactgaaactcacgaaagacgtgatgttgcctaatttccaa
atcccgtctactttcttaagtcaggatgattatttggagcacatcacgatggaaggcgct
aaaaagcgttacatcgatattgaccaggtcgtagaagagcgtttgcgctttgagttacat
accatcagaacgatgggttttgccggttacttcttaattgtagccgattttattagtgct
ggacgtgatttaggcgtttatgtggggccaggtcgtggatcagcggcgggttcagtggtg
gcttattgtttgggaattacaaacattgaccccattaagtacaatctcctttttgagcgt
ttcttgaatccagatcggaagtccttacccgatattgatacggactttgatgatgagggc
cgccaaaaagtgatcgactatgtcgtagataaatacggtaaaaaccaagtagcgcacatt
gcgacctatggtacgatggctgcgaaaatgtctattaaggacgtttctcgcgttctagac
ctccccttgcaggaatccaatgccttagcgaaactggttccggagaaaccgaaaattaca
ctagaccgtatttttaatgcggctttgacgggtgataagagtttagccgataaggaagga
cttaatccggaagaattagaacaggttaaggaattgcgtcgcattaaggaagctggtggt
ttgccagctaccgtaatcgaaaatgcgctaattttagagggttctgttcgtggaacaggt
attcacgcggcgggtatcatcattgcaccttctgatttaacggatatattgccggtagct
acttcgaaagatgtgagtctattgattacgcaatacgacggttcggtaattgagaatgcg
ggggtaattaagatggactttttgggcttaaaaaccctctctatcttgaaagaggccgtt
cgcttaatcaagcagaaccacaatgagacgatcatcttggatgacctacctttggacgat
aaaacaacctacgaattataccaaagagccgaaacgaacggtaccttccaatttgaatcc
cctgggatgcagaaacacttacgtgatcttaagcccgatcaattctctgatttaattgcg
atgaacgccttgttccgtcccggtccgatggtctacattccgaattacattgcccgtaaa
cacggtcgcgagaagattgaatacgatttaccagaaatggaggagtatttgagcgataca
tacggaattacggtctaccaagagcaagtaatgcttctctcccagaagctagcgaatttt
acgaagggtgacgccgacgtacttcgcaaggcgatgggtaaaaaagacaaagccaccatc
gataagatgaagggtaagttcatggaaggcggcgcggcgaataatcaccctgtggacaag
ttggataagatttggacggactgggaagcatttgctcaatatgcctttaacaaatcccac
tcaacttgctatggtttagtagcttaccaaacaggttacctgaaagcaaactacccacct
gagtttatggcggcggtactttcgaactctttaggtaacattgagaagatcactttcttc
atggatgagtgcaagcggatgggcttatctttattagttccggatgtaaatgaatcctct
cgctcgtttgcggtgaataagaaaggccaaatccgtttcggactaggtgcgatcaaaggt
gtgggtgatgcggcggttgatgcaattgtggaggagcgtcagaaaaatggcgaatacaag
gatatttttgacttcgtttctcgaatcaatgtacgtcaggtaaacaagaagagtttagaa
tcgcttgcacttgctggggcatttgattgttttactgaagtggctcgatctcattatttt
gctatcgattcacaggataatacgaattttattgagaaaattgttcgctattcgtcccgt
atggcagaattgaaggcagaagctactgcttccctttttggtgaattaggagctggaacg
ggtaatgacatcgctcagcctaagatccctactgctgaaccttggtctgtgatggagcaa
ttgaagaatgagaaggaagtggtgggcgtttatatttctggtcatcctttggacgaatac
aaaacagagatcgctaatttctgtaattcgaatacgggtcaattagaattacgtccgaat
gtagcacagacttttgccggtatcgttaccaaagtaaacgttagaacctctgcgaatgga
aatcagtttatgatttttacgattgaggattatgcaggtaattatgagttcgccttgttc
tcgaaggattatatccagtttgaacgtttcattgcacaagaccgtttattgttcataaat
ggctcgtatcaattgaagaatcgccatatggaccaaatggtcttcaagattcaatccatc
gaattgttgtcagaaatcttatccgatcgaacaaaagagatcaaattgcgtttagactta
aatcggttgactcctgctttattggatttattgcaggaaacgttagagcgaaataaaggt
gataagaagttgaccttagaggtgtatgatgagcacgagaaaatcgggatggacttttta
tcgcgtaaaatgcaggtttgcattggtaaaggcttgatttctgagcttaaagagcttgaa
aatgtgggctttaagttaatttcgtaa
DBGET
integrated database retrieval system
