Arenibacter antarcticus: KCTC52924_00048
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Entry
KCTC52924_00048 CDS
T10841
Symbol
deaD_1
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCTC52924_00048 (deaD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aanr03019
]
KCTC52924_00048 (deaD_1)
03009 Ribosome biogenesis [BR:
aanr03009
]
KCTC52924_00048 (deaD_1)
Enzymes [BR:
aanr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KCTC52924_00048 (deaD_1)
Messenger RNA biogenesis [BR:
aanr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KCTC52924_00048 (deaD_1)
Ribosome biogenesis [BR:
aanr03009
]
Prokaryotic type
rRNA helicases
KCTC52924_00048 (deaD_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_helical
DbpA
ResIII
RecG_N
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XHP72327
LinkDB
All DBs
Position
47473..49305
Genome browser
AA seq
610 aa
AA seq
DB search
MTKFEALGLDQSLLNAISDLGFESPSEVQEKAIPILLESDTDLVALAQTGTGKTAAFGFP
LIQKIDRESKTTQGLILSPTRELCMQITNEMVQYSKYEKGLNVVAIYGGASITDQARQIK
RGAQIIVATPGRMKDMIGRGLVDISKLDYCILDEADEMLNMGFYEDIKDILSNTPKEKSI
WLFSATMPKEVSLIAKKFMKNPQEITVGTKNAGTSTVQHEYYVVGGRDRYPALKRLADTN
PDIFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQNQRDLVMNSFRKKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITRSELRKIKAIENK
IQQSFIAKTIPTGMEICEIQLYHLANKIKDTKINKEVDHYLPAINDVLSGIDREELIKKI
VSVEFTRFFNYYNKTKDLNTSGASERGERGMESSNGAPDNGNVRYFINVGEKDGYDWMSL
KDFIRDTVSLGQDDIFKVDVKESFSFFNTDAASTEAILKTFTEFKVDGRFVNVEVSKSPG
GGGGRSNRGGNRDSGRSGGGSRSGGGRSGGGRDFRDNDRSRSKRSDRGPAKGNSSSSSGK
RRSPRKSDSY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttgaagcattagggctagatcagtccctattaaatgctatttctgacctt
ggatttgaaagtccttcagaagtacaagaaaaagcaatcccaattttattggaaagtgac
acagatttggttgcccttgcccagacagggacaggtaagaccgctgcgtttggatttcca
cttatccaaaagatagatcgcgaaagcaagactacccaaggattaatcctatcccctacc
cgtgagctttgtatgcagatcaccaatgaaatggtgcagtattccaaatacgaaaaaggg
ttgaacgtagttgccatttatggtggtgcaagtataaccgatcaggcaagacaaataaaa
agaggtgcacaaattattgtagctacccctggtagaatgaaggatatgattggtcgtggt
ttggtagatatttccaaattagactactgtattctagatgaggccgatgaaatgttgaat
atgggcttctatgaggatatcaaggatattctatccaatacccctaaggaaaaatccata
tggttgttttcagccaccatgcccaaggaggtatcattaatcgccaagaaattcatgaaa
aatccacaggaaattactgtgggtacaaaaaatgctggtactagtaccgtacagcacgaa
tattacgttgtaggtggaagagatcgttatcctgctttaaaaaggttagcagataccaac
cccgatattttttccgttattttctgtagaaccaagagagacacccaaaaggtggctgaa
aaattgatcgaagacggatacaatgcaggagcattacacggagaccttagccaaaaccaa
agggatttggtaatgaattccttccgtaagaaacaaattcaaatgctggtagcaacagac
gttgctgcaagaggtatagatgttgatgatattacacacgttatcaactatcaactcccc
gatgaaatagaaacctatacccacagaagtggacgtacaggaagagctgggaaatcaggg
atttcaatggtaattattactcgaagcgagcttcgtaagattaaagccatagaaaataag
attcaacagtcctttatagctaagacaattccaacagggatggaaatctgtgaaatacag
ctttatcacttagccaataaaataaaggataccaaaataaataaagaagtagaccattat
ttaccagcaatcaacgacgtactttccggaatagatagggaagaattgattaaaaaaatt
gtttcagtagagtttacccgcttctttaattattacaacaaaaccaaggaccttaatact
tctggcgctagtgaaagaggcgaaagaggcatggagagcagtaatggcgccccagacaat
gggaacgttagatactttatcaatgttggggaaaaggacggttatgactggatgtcccta
aaggattttatcagagataccgttagcctagggcaagacgatatttttaaagtcgacgtt
aaggagagtttttccttctttaacaccgatgccgcatctactgaggccatcttaaagacc
tttaccgaatttaaggtcgacggaagatttgttaacgtggaagtttccaaaagcccaggt
ggtggtggtggcagaagcaacagaggtggaaaccgtgatagcggcagaagcggtggcggt
agcagaagtggcggtggcagaagcggaggcggaagagatttccgtgataacgaccgaagc
agaagcaaaagaagtgaccgtggccctgccaaaggaaactcttccagtagttctggaaaa
agaagatcgccgagaaaaagcgactcctattag
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