Arenibacter antarcticus: KCTC52924_00084
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Entry
KCTC52924_00084 CDS
T10841
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCTC52924_00084 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aanr03019
]
KCTC52924_00084 (rhlE_1)
Enzymes [BR:
aanr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KCTC52924_00084 (rhlE_1)
Messenger RNA biogenesis [BR:
aanr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KCTC52924_00084 (rhlE_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ANIS5_cation-bd
ERCC3_RAD25_C
CMS1
Expansin_C_term
SUa-2TM
HEM4
DUF3023
Motif
Other DBs
NCBI-ProteinID:
XHP72363
LinkDB
All DBs
Position
82909..84186
Genome browser
AA seq
425 aa
AA seq
DB search
MTFKDLGIIEPILKALEAEGYTNPTPIQEQSIPILLKGKDLLGCAQTGTGKTAAFSIPII
QQLVLDKDANLQQRKIRTLVVTPTRELAIQIGENFASYSRFTGIRSTVIFGGIKQARQTE
ALRKGVDVLIATPGRLLDLMNQGFISLRDVKYAVLDEADQMLDMGFIHDIKKIIAKLPDN
RQSLFFSATMPKAIVELSRKLLGDFEQVTIKPQQATAEKVEQALYFVSKKNKPDLLIHLL
EKDPNDSALVFSRTKHGANKIVKQLAKADIKADAIHGNKSQNARQKALGDFKDGELKVLV
ATDIAARGIDVEELSLVINYDLPNVPETYVHRIGRTGRASASGVAISFCDAEERPYLKDI
QKLINQQVPVIKDHPFVDDGVEEVPLQPEKRHHNNKQQQRTGHSNPRGGRNNNRGKNNSS
RPKRD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaaagacttaggtattatagagccaatcctaaaagcccttgaggctgaaggc
tatacaaatcccactccaattcaagaacaatccattcccatattattaaaaggtaaggac
ttgttgggctgtgcacaaacgggtaccggtaaaacggcggccttttcaattccaatcatt
caacaacttgttctagataaggacgccaatctgcaacaacgcaaaattagaaccttggta
gtgacccctactcgggaattagccatacaaatcggggaaaattttgcctcctattcccga
tttacgggaattagaagcactgttatttttggcggtattaaacaagcgagacaaacggaa
gccctaagaaaaggggtcgatgttctaattgcaactccaggaagattgctcgatcttatg
aaccagggttttatttccttacgagatgtaaaatatgcggtactggacgaggcagaccaa
atgttggatatgggttttatacacgatataaaaaagataattgccaaacttccggataac
cgtcaatcgcttttcttttcggcaacaatgcccaaagctatcgtggaattgtcacggaaa
ttattgggtgattttgaacaagtcaccatcaagcctcagcaagccacggcagaaaaggta
gaacaagccttatattttgtctctaaaaaaaataaaccggatctattgatccacctgttg
gaaaaggaccccaacgattctgcattggttttttcgagaaccaagcacggtgccaataaa
attgtaaagcaattggcaaaagccgatatcaaggcagatgcaattcatggtaacaaatcc
caaaatgcaaggcaaaaagccttgggtgattttaaggacggggaactaaaggtacttgtt
gcaacggatatagctgctagaggtatagatgtagaggaactatccttggttatcaattat
gaccttcccaacgtgcccgaaacctacgtccaccgtattggaaggaccggaagggccagt
gccagtggagtcgcaatttctttttgcgatgccgaagaaagaccctacctaaaagatatc
cagaagttgatcaaccaacaagtgccggttattaaagaccatccttttgtagatgatggt
gttgaagaggtgcctttacaaccagaaaaaagacatcacaacaataagcagcaacaaagg
actggacattccaacccgcggggaggtagaaataacaaccggggcaaaaataacagcagt
agacccaaaagggattaa
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