Arenibacter antarcticus: KCTC52924_00268
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Entry
KCTC52924_00268 CDS
T10841
Symbol
rny_1
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCTC52924_00268 (rny_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aanr03019
]
KCTC52924_00268 (rny_1)
Messenger RNA biogenesis [BR:
aanr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KCTC52924_00268 (rny_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
DFF40
Motif
Other DBs
NCBI-ProteinID:
XHP72546
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Position
complement(311854..313419)
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AA seq
521 aa
AA seq
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MESIAIIMGLVGLVIGFAIAKFMEKGKGSKIISNAKKEGANIVKEAQIEGDNIKKDKIFQ
AKEKFLELKAEHEKVIINKDKKISEAEKRTRDKESQVSSELAKGKKMSDQLESKLKEVDY
KSEFFDKKQSELEKLHKSQVQQLEVISGLSADDAKSQLLESLKETAKSDAMSFIQNTIEE
AKLTAHQEAKKIVINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRALEAATG
VEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVKKTEKQIEEEIVE
IGKRTVIDLGIHGLHPELIKAVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPKLA
KRAGLLHDIGKVPNTEAEVETPHAILGMQWAEKFGEKEDVCNAIGAHHDEIEMKTLIAPI
VQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFGGVQKAYAIQAGRELRVIVESERV
SDDRAAELSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagagtatagcaataataatgggtttggttggactggtgatcggttttgccattgca
aagtttatggagaagggcaaggggtccaagatcatttccaacgcaaaaaaagaaggagcc
aacatcgttaaggaggctcaaattgaaggtgataatattaaaaaagacaaaattttccag
gccaaagaaaagtttttggagcttaaggccgaacatgaaaaggttataataaacaaggat
aaaaagatctccgaagcagaaaaacgcacaagagataaagaatctcaagtgagtagtgaa
cttgctaaggggaagaaaatgagtgatcaactggaaagcaagttgaaagaagtcgattat
aaaagcgagtttttcgacaagaaacaatccgagttagaaaaacttcataaaagccaagtg
caacagttggaagttatttctggattgtctgcagatgatgcgaaatcacaattgttggaa
tccctaaaggaaaccgccaaatccgatgccatgtcctttatacagaacactattgaggaa
gctaaacttacggcgcatcaggaggctaagaaaattgtaataaatacgatacagcgaatt
ggaactgaagaggccgttgaaaattgtgtctctgtgtttaatttggaatccgatgatgtt
aagggtagaattataggccgtgagggtagaaatattagggctttggaagcggcaacaggc
gtagagatcattgtagacgataccccagaggctattatcctttcgtgtttcgattccgtt
agaagggaagttgcccgactatcacttcataaattagttaccgacggaaggatacatccg
gcacgtattgaggaggtcgtgaaaaagacagagaaacagatagaggaagagatagttgaa
attggtaaacgtaccgtaatcgatcttggaatacatggactgcatccagaattgattaaa
gccgtggggagaatgaaatacagatcctcttatggtcagaatcttttacaacactctaga
gaggtagctaaactctgtggagttatggcggccgaactaggtttaaacccaaaattggca
aaacgtgcaggtctattgcacgatattggtaaggtgcccaacacagaagccgaagtagag
accccacatgctatccttggaatgcaatgggcggagaaatttggtgaaaaagaagatgtt
tgcaacgctataggagctcaccacgatgagattgagatgaagaccttgatcgctcctatc
gtacaggtgtgtgatgctattagcggtgccaggccgggtgcaagaagacaggtgttggat
tcctatatccaacgtctaaaagacttagaagagatcgctttcggatttggtggggtgcaa
aaagcatatgccatccaagcggggagagaacttagggttatcgtggaaagtgaaagagtt
agcgatgacagagcagcagaactttcttttgaaatttctcaaaaaatacagaccgatatg
acctatcctgggcaggtgaaagttaccgttatccgggaaacaagggctgtaaacgtcgct
aaatag
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