Arenibacter antarcticus: KCTC52924_00281
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Entry
KCTC52924_00281 CDS
T10841
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aanr Arenibacter antarcticus
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aanr03009
]
KCTC52924_00281 (rlmCD)
Enzymes [BR:
aanr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KCTC52924_00281 (rlmCD)
Ribosome biogenesis [BR:
aanr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KCTC52924_00281 (rlmCD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRAM
Cons_hypoth95
TRM5-TYW2_MTfase
PCMT
Methyltransf_11
Methyltransf_ANTKMT
FtsJ
Methyltransf_37
N6_N4_Mtase
PrmA
Methyltransf_12
UPF0020
Methyltransf_2
Methyltransf_4
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
XHP72559
LinkDB
All DBs
Position
322661..324127
Genome browser
AA seq
488 aa
AA seq
DB search
MGLNPEKFPYFCAMRRKNKRQIFENVEVVDAGAKGKTIGKAPDGRVIFLTNTVPGDVVDV
QTTKKRKAYFEGEAIHFHSLSQKRTTPVCEHFGVCGGCKWQDMGYEHQLFYKQKEVENNL
RRIGHLELPETLPILGSKKQYFYRNKMEFSFSDSRWLTLEEINSGKDIEDKNALGFHIPG
MWDKILDIKKCHLQDDPSNAIRLAIKEFAIENDLSFFNPRNQHGLLRTVMIRTSSTGEIM
VLVQFFENDQEKRQLLMDHLAAKFPEITALLYVVNSKQNDTIYDQEIVCYAGRDHIFEAM
EGLQFKITAKSFYQTNSDQAFELYKITREFAALTGEELVYDLYTGTGTIAQFVAKNSKKV
VGIESVPEAIADAKANAERNNISNVEFFVGDMKNVFNETFIATHGKPDIIITDPPRDGMH
KDVVQQILNISPEKVVYVSCNSATQARDLELMKDDYEVAKVQPVDMFPQTHHVENVVLLK
KRKNPIQS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggattaaatcctgaaaaattcccctatttttgcgccatgcgcagaaagaataaaaga
cagatttttgaaaacgtagaggtggtagatgccggagcaaaaggcaagactataggcaaa
gctcctgatggcagggtaattttccttaccaataccgttcccggtgatgttgtagacgta
cagaccacaaaaaaaagaaaagcctattttgagggtgaagcgatccattttcacagctta
tcccaaaaaagaacaacccccgtatgtgagcattttggggtttgtggcggatgcaagtgg
caggatatgggatatgaacaccagttgttttacaaacaaaaagaggtggaaaataattta
cgtaggatagggcatttggaactcccagaaaccctgccaattttaggttccaaaaaacaa
tatttctatagaaataaaatggaattttctttttcggatagccgatggttaaccttggag
gaaataaattctggtaaagatatcgaagataagaatgccttaggcttccatattccaggc
atgtgggataaaattctcgacattaaaaaatgtcatttacaggatgacccatccaatgcc
attcgtttggccattaaagaatttgcgatagaaaatgacctttcattttttaatccacga
aatcagcatggtttattacgaacagttatgatacgtacgtcatctactggtgaaattatg
gtattggtccaattttttgagaatgaccaagaaaagcgtcagcttttaatggatcatctc
gccgccaaattcccagagattacggcattactttacgttgttaactcgaagcaaaacgat
accatctacgatcaagaaattgtctgttatgcaggaagagatcatatatttgaggcaatg
gaaggtcttcagtttaagataactgcaaaatctttttaccaaaccaactcggaccaagcc
tttgaactatacaaaataacaagggaatttgctgctctcacgggagaagagttggtatac
gatctttataccggcacgggtactatagcccaatttgtagcaaaaaattccaaaaaggta
gttggtatagaatccgtcccagaggcgattgccgatgcaaaagcaaatgcagaaagaaac
aacatttccaatgtagagttttttgtcggggacatgaaaaatgttttcaatgagaccttc
attgctacccacggcaagcccgatattataatcacagaccccccaagggatggaatgcat
aaggatgtggtgcaacaaatcctcaatatttccccagaaaaagtggtttacgtaagttgt
aacagtgccacacaggcaagggatctagagctgatgaaggatgattatgaagttgccaag
gtacagcctgtagacatgtttccccagacccaccatgtggaaaatgttgtacttttgaaa
aaacgcaaaaacccgattcaatcgtaa
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