Arenibacter antarcticus: KCTC52924_00340
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Entry
KCTC52924_00340 CDS
T10841
Symbol
truA_1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aanr Arenibacter antarcticus
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aanr03016
]
KCTC52924_00340 (truA_1)
Enzymes [BR:
aanr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KCTC52924_00340 (truA_1)
Transfer RNA biogenesis [BR:
aanr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KCTC52924_00340 (truA_1)
Prokaryotic type
KCTC52924_00340 (truA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
XHP72610
LinkDB
All DBs
Position
complement(379744..380496)
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AA seq
250 aa
AA seq
DB search
MRYFIQFAYHGKRYHGSQIQPNAITVQEVLQTALSLILKESIQIMAAGRTDAGVHARVMY
AHFDFSSVLESGPLLYRLNAFLPADVVVQQIFPVPDDAHARFDAEERTYEYWVTGKKDPF
LFDAAYYVKYPLNIAEMNKAATILVGHRDFQCFSKSKTDVRTYICDLRSAIWTTDEEKMV
FTIRADRFLRNMVRAVVGTLINVGTGKTPLKDIPAIIESKDRSKAGISVPAKGLYLTAIK
YPDNIINNHG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttatccaatttgcatatcacggtaaaaggtatcacggttcccaaattcaa
ccaaatgctattacagtgcaagaggttttgcaaaccgctctgtccctgatcttaaaagaa
tccatacagattatggctgccggaagaacagatgccggagtgcatgcaagagtaatgtat
gcccattttgattttagttcagtattggaaagtggtccgttgttatataggttaaatgca
ttcttgcccgctgatgtagtggtgcagcaaattttccctgtaccggatgatgcgcatgcg
cgttttgatgccgaggagcgtacctatgaatattgggtgacgggcaagaaagatcctttt
ttgttcgacgcagcctattatgtgaaatatccgttaaatattgcggagatgaacaaagcg
gccactattttagtgggacatagggattttcagtgcttttcgaaatcaaaaaccgatgta
aggacctatatatgtgatctgcgtagcgcaatttggacaacggatgaggagaaaatggta
tttacaattagagcggatcggtttttgcgaaatatggtgcgtgccgttgtgggaacgttg
atcaatgtagggacgggtaaaacgcccttgaaggatattcccgctattatagaaagtaag
gatagaagtaaggcagggatatcagtgcccgcaaaaggattatatttaactgcgataaaa
tatccagataatattattaataaccatggataa
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