Arenibacter antarcticus: KCTC52924_00879
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Entry
KCTC52924_00879 CDS
T10841
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03030
DNA replication
aanr03430
Mismatch repair
aanr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCTC52924_00879 (dnaE_1)
03430 Mismatch repair
KCTC52924_00879 (dnaE_1)
03440 Homologous recombination
KCTC52924_00879 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aanr03032
]
KCTC52924_00879 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
aanr03400
]
KCTC52924_00879 (dnaE_1)
Enzymes [BR:
aanr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCTC52924_00879 (dnaE_1)
DNA replication proteins [BR:
aanr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCTC52924_00879 (dnaE_1)
DNA repair and recombination proteins [BR:
aanr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCTC52924_00879 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
XHP73139
LinkDB
All DBs
Position
complement(1022221..1026606)
Genome browser
AA seq
1461 aa
AA seq
DB search
MFLIFDTETTGLPKRWNAPYTDTDNWPRCIQIAWQLHDDMGRLVESQDYLVRPDGFNIPY
DAEQIHGISTELAQEKGVSIEEVLQKFNEALGKAKFVVGQNVGFDLNIMGAEFHRYHVAN
SLQELPVLDTCTEHTAKLCQIPGGRGGKFKLPTLTELHQYLFGEPFGEAHNATADVEATT
RCFLELLRRKEYTEEQLDVTPDYFKNFSEANPQEIQLIGLKHINLKKASKKIADKLWAKD
TGVISQEEIKENIRTLEDAQFVHLHNHSQFSVLQSTMSVAELVQNAAKEKMPAVALTDHA
NMMGAFHFVTAVNGHNSKVKAKNAEALENGEAPTEQEIKAILGCEFFVCEDHTNKSVKDH
GYQIVILAKNKKGYHNMAKMSSIAYTDGFYYVPRIDRKVIEKYKEDLIVLTGNLYGEVPG
KILNVGENQAEEALLWWKEQFGDDLYIEIMRHGQEDEDRVNQVLVAFAQKHQVKMVATNN
TYYGAKEDAEAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSDSQMKEAFKDLPD
SILNIQEVVDKVESYELARDVLLPIFDIPEQFKVVEDVVDGGKRGENAYLRHITYEGAKK
RYAEITEEIRERLDFELTTIENSGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVAY
CLKITNIDPLKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVIKKYGSNQVAQIIT
YGTMAAKSSIRDTARVLDLPLGDADRISKLIPTMSKLSKIFGVSVADLKKKFRSEELEKV
NELLNIAEGHDLEARTLKMARILEGSVRNTGIHACGVIITPSDITNFVPVATAKDSDLYV
TQFDNSVVENAGLLKMDFLGLKTLTLIKDTVKIVKLKHDIDLVPDDFPLDDEKTYELFQK
GDTVGVFQYESPGMQKHMKDLKPTVFDDLIAMNALYRPGPMEYIPSFIARKHGAEEITYD
LADMEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKIFALLEKLKPQFLD
GGEKKGHPREVLEKIWKDWEAFASYAFNKSHSTCYAYIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMGLAVLGPDVNESYYKFAVNAEGAVRFGMGAIKGVGRGAVETI
VEHRKEGGPFKSVFDLSKRIDLRAANKKAFENLALAGGFDSFGNTHRAQYFHDEGDGITF
LEKVIKYGNKYQENKNSSQVSLFGDASDVQIPEPEVPPCEEWGTMGKLRREKEVVGIYIS
GHPLDDFNIEIKAFTNANITAVANMGEFVNKELTFAGVISDVQHRTAKNGKGWATFIVED
YTDSMEFRIFGEEYLKYRHFLMINSFAYFKIFIKEGWVNRDTGKKSDPRMQFNMIMMLQE
VMETFAKKLTIKLDITQLKEDTILDLKDTLISHDGSHPLSFVVYEMEEKIKVNMTCRKRK
INISSELLLQLNEKEVHYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgttcctaatttttgataccgagaccacaggattgccaaagcgctggaatgctccgtat
accgacaccgataactggcctcgatgtatacagattgcttggcagttgcacgatgatatg
gggcgactagtggagagtcaggattatttggtgcgtccagacggatttaatattccctat
gatgcagagcagatacacggaatttccacggaattggcgcaggaaaaaggggtgtccata
gaagaggtgcttcaaaagtttaatgaagctctggggaaggccaaatttgtggttgggcag
aatgtagggttcgaccttaatattatgggggccgaattccatcggtaccacgtagcgaac
agcttgcaggaattaccagtcttggatacctgtaccgagcataccgccaaactgtgccag
attcccggaggaaggggaggaaagtttaaattacccacccttaccgaactgcatcaatac
ctatttggagagccctttggggaagctcataacgcaacggcggatgtggaggctactacc
cgttgtttcttagagctattgcgccgcaaggaatataccgaggagcaactggatgtaacc
ccagattatttcaagaatttctcagaagccaatccgcaggagatccaattgattggctta
aagcacatcaacctaaaaaaagcttccaaaaaaattgccgataagttatgggcaaaggat
acaggggttatttctcaggaagaaatcaaggaaaatataaggaccctagaggacgcacaa
tttgttcatcttcataaccactctcaattttccgtattgcagtctaccatgtctgtagca
gaactggttcagaatgcagccaaggaaaaaatgccggctgtagcccttacagatcatgcc
aatatgatgggggcattccattttgttactgcggtaaacggtcataattccaaagtaaag
gccaagaatgctgaagctttggagaatggcgaagcacctaccgaacaagagataaaggca
attttaggatgtgaattctttgtttgtgaggaccatactaataaaagtgtaaaggaccac
gggtaccagatcgttattttggccaaaaacaaaaaggggtatcacaatatggccaaaatg
tcgtccattgcttatacggacggattttattatgtgccacgaatcgatcgcaaggtcata
gaaaaatacaaagaagatctaattgtacttacggggaacctctatggggaagtgcccggt
aaaatattgaacgttggggaaaatcaggctgaagaggccctgttgtggtggaaagagcag
tttggcgatgacctttatatagagatcatgcgtcatggccaggaagatgaggatcgggta
aatcaggttttggtggcttttgctcagaagcatcaggtaaaaatggtggctaccaataat
acctattatggagccaaggaagatgcggaggcgcacgatattctattgtgtgtaaaggac
ggagagaaacaggctacccctattggtcgtgggcgtgggtataggtacggtctgcctaac
caagaatactattttaaatcggactcccagatgaaggaggcctttaaggacctaccagat
tctattttaaatattcaagaagttgtagataaggtagagtcttatgagctcgctagagat
gtcctattgcccatatttgatattccggagcaatttaaggtagtcgaagatgtagtggac
ggtgggaaaagaggtgaaaatgcttatttaagacatattacctatgaaggggccaaaaaa
cgctatgcggagattacggaggagataagggagcgactggattttgagctgacaaccatt
gagaattctggctatccaggatattttttgatcgtggaagattttattcgcgaggctagg
aatatggatgtttccgtaggaccgggaagggggtctgccgcggggtcggtggtggcctat
tgccttaaaatcaccaatatagaccccttaaaatacgacctgctttttgagcggttccta
aatccagacagggtgtccatgcccgatatcgatatcgattttgatgatgaggggagaggc
cgtgtaatggattatgtgattaaaaagtatgggtccaaccaagtagctcaaattattacc
tacgggaccatggcggcaaaatcctcaatacgggatacggcaagggtgttggacttgcct
ttgggagatgccgataggatttccaagctgattccgaccatgtccaaattgagcaagatt
tttggggtcagtgtggctgatcttaaaaagaagttccgttccgaagagttggagaaggtc
aatgagttgctgaatatcgctgaaggtcatgatctggaagcacggaccctgaaaatggct
aggatattggaaggctcggtcagaaatactggtatacatgcctgtggggtaatcataacg
cccagcgatatcaccaattttgttcctgtagccacggctaaggattctgacctttatgtt
acccagtttgacaactcggtagtggaaaatgctggtctgttaaaaatggatttcttgggg
ctgaaaacgttgacccttatcaaggataccgtgaaaattgtaaagttaaagcacgatata
gatcttgttcccgacgattttcccttggatgatgaaaagacctatgagcttttccagaaa
ggggataccgtaggggtgttccaatacgaatctcccgggatgcagaaacacatgaaggat
ctaaagcctacggtgtttgatgaccttatagctatgaacgccctgtacagaccagggcca
atggaatatatcccgagctttattgctcgtaagcacggggcggaagagattacctatgac
ctagcggatatggaggaatacctaaaggaaacttatggtattacagtgtatcaggagcag
gtgatgctactctcacaaaaattggcaggcttttccaagggtgatgccgatgttttgcgt
aaggcaatggggaaaaagatctttgcccttctagaaaaattaaaaccacaattcctggat
ggcggtgagaaaaaaggccatcccagagaggttttagaaaaaatttggaaagattgggaa
gcttttgcctcctatgcctttaataagagtcactctacctgttacgcctatattgcgtac
cagacggcctacctaaaagcgcattaccctgccgaatatatggcggcggtactttccaat
aacatgaacgatataaagcaggtcaccttctttatggaggagtgtaaacggatgggccta
gcggtattggggccagatgtaaacgaatcctactacaaatttgccgtaaacgcggaaggg
gccgtgcgttttggtatgggggccatcaaaggggttggccgaggtgctgtggagaccata
gtggagcatagaaaggagggcggaccctttaaatctgttttcgatctttcaaagcgtatc
gatctgcgagccgccaataaaaaagcgtttgagaatttggccttggcaggcggattcgac
tcctttgggaatacgcatcgagcacaatattttcacgatgaaggggatgggataaccttt
ttggaaaaggtgataaaatatgggaataagtatcaggaaaataaaaattcgtcccaagta
agtcttttcggtgatgccagtgatgtgcagattccagagcctgaagtgccgccttgtgag
gagtggggcaccatggggaaactccgaagggaaaaggaggttgtcgggatttatatatcc
ggacatccgttggacgattttaatattgaaataaaggcctttaccaacgccaatataact
gcagtagccaatatgggcgaattcgtcaataaggagcttacctttgctggagtaatatcg
gatgtgcaacataggaccgccaaaaatggaaagggatgggccacgtttatagtggaggac
tatacagattctatggagttccgcatctttggggaagaatacttaaagtataggcacttc
ttaatgatcaattcatttgcctattttaagatatttataaaagaaggttgggtgaatcgt
gataccggaaaaaagagcgatcccagaatgcagtttaatatgattatgatgctgcaggag
gtaatggagacctttgcaaagaagctgaccattaaattggatattacccaattaaaagaa
gatactatcctagatctaaaagatactttgatctcgcatgatgggagtcatccgctgagc
tttgtggtgtacgaaatggaagagaagataaaagtaaacatgacttgtagaaaacggaaa
atcaatatttcaagtgaactactgttgcaattgaacgaaaaagaagtacattacaagttg
aattag
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