Arenibacter antarcticus: KCTC52924_01188
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Entry
KCTC52924_01188 CDS
T10841
Symbol
ribD_1
Name
(GenBank) Riboflavin biosynthesis protein RibD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr00240
Pyrimidine metabolism
aanr01100
Metabolic pathways
aanr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KCTC52924_01188 (ribD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aanr02044
]
KCTC52924_01188 (ribD_1)
Enzymes [BR:
aanr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
KCTC52924_01188 (ribD_1)
Secretion system [BR:
aanr02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
KCTC52924_01188 (ribD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC4_like
NAD1
APOBEC2
APOBEC3
APOBEC1
APOBEC4
CoA_binding_2
NAD2
Motif
Other DBs
NCBI-ProteinID:
XHP73445
LinkDB
All DBs
Position
complement(1401222..1401659)
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AA seq
145 aa
AA seq
DB search
MKERKQEKYDRAYLRMASEWGKLSYCQRKQVGAIIVKDRMIISDGYNGTPTGFENICEDD
EGYTKWYVLHAEANAISKVASSTQSCEGATLYITLSPCKECSKLIHQSGIKRVVYQKGYK
DDSGLQFLEKAGVEIIQMPIIVNMD
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacgcaagcaagaaaaatacgatagagcgtatttgcgaatggcaagcgaatgg
gggaaactctcctattgccaacggaaacaagttggagctataattgtaaaagataggatg
atcatctccgatggttataacggcacccccactggatttgaaaatatatgcgaggatgat
gaaggatataccaaatggtatgtattgcatgccgaggccaatgccatctcaaaagttgcc
tcctctacccaatcctgtgaaggagctactttgtatattaccttatctccctgcaaagaa
tgcagtaaattaattcatcagtctggtataaaacgtgtggtatatcagaaaggatataaa
gatgactccggtcttcaatttttggaaaaggcgggggtagaaataattcaaatgcctata
attgtaaatatggactaa
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