Arenibacter antarcticus: KCTC52924_01298
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Entry
KCTC52924_01298 CDS
T10841
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr00521
Streptomycin biosynthesis
aanr00523
Polyketide sugar unit biosynthesis
aanr00525
Acarbose and validamycin biosynthesis
aanr00541
Biosynthesis of various nucleotide sugars
aanr01100
Metabolic pathways
aanr01110
Biosynthesis of secondary metabolites
aanr01250
Biosynthesis of nucleotide sugars
Module
aanr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KCTC52924_01298 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KCTC52924_01298 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KCTC52924_01298 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KCTC52924_01298 (rfbB)
00525 Acarbose and validamycin biosynthesis
KCTC52924_01298 (rfbB)
Enzymes [BR:
aanr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KCTC52924_01298 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NmrA
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
XHP73555
LinkDB
All DBs
Position
1524444..1525487
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AA seq
347 aa
AA seq
DB search
MNILVTGGAGFIGSHLVRRLVNSYPNYHIYNLDALTYAGNLENLTDVESASNYTFIKGDI
TDADVIESLFLKYKFDGVIHLAAESHVDRSITDPLAFVKTNVMGTVNLLNSFKSIWSDNF
AGKRFYHVSTDEVYGSLGKTGLFTETTSYDPNSPYSASKASSDHFVRAYGETYGLPYVIS
NCSNNYGPHHFPEKLIPLFINNIIQNQPLPVYGDGNYTRDWLYVEDHARAIDLVYHKGQN
TETYNIGGFNEWKNIDLVKLLCQQMDDKLGRPSGDSEKLITYVKDRPGHDLRYAIDASKI
NQELGWEPSVTFEEGLAKTIDWYLANEAWLARVTSGAYQTYYKKQYQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacatattagttaccggtggggctggatttataggttcccatttggttagaaggtta
gtgaattcgtatccaaattatcatatttacaatttggacgccttgacatatgccggaaat
ctagagaatttaacagatgtggaatcggcttcaaattatacctttatcaaaggagatatt
acggatgccgatgtaatagaatccctttttttgaagtataagtttgacggtgttatccat
ttggcggcggaatctcatgtagatcgatctattaccgatcctttggcttttgtaaaaacc
aatgtaatgggaaccgtaaatttgttgaactccttcaaatctatttggagtgataatttt
gctggaaagcggttttatcacgtaagtactgatgaagtatatggttctttggggaagact
gggttgtttacagaaactacttcctacgacccaaactctccttattctgcctccaaggcc
agttccgatcattttgttagggcttatggcgaaacctatggtttgccttatgtaatcagt
aattgttctaacaattacggcccccatcattttccggagaagttaattcccttatttata
aataatattatccaaaatcagcccctaccggtgtatggagacgggaattacactagagat
tggctttatgtagaagatcatgccagggcaatagacctagtatatcataagggacaaaac
accgaaacctataacattggcggttttaatgaatggaaaaacatcgatttggtaaaattg
ctgtgccaacaaatggatgataaactgggaaggccatccggggatagcgaaaaactgatc
acctacgtaaaggacagaccggggcacgacctgcgttatgccattgatgcctccaaaata
aaccaggaactgggttgggaaccctccgttacctttgaagaaggtttggcaaaaacaatc
gactggtatttggccaatgaggcgtggttagcacgtgttacctctggagcatatcaaacc
tattataagaaacaataccagtaa
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