Arenibacter antarcticus: KCTC52924_01962
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Entry
KCTC52924_01962 CDS
T10841
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03030
DNA replication
aanr03430
Mismatch repair
aanr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCTC52924_01962 (dnaE_2)
03430 Mismatch repair
KCTC52924_01962 (dnaE_2)
03440 Homologous recombination
KCTC52924_01962 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aanr03032
]
KCTC52924_01962 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
aanr03400
]
KCTC52924_01962 (dnaE_2)
Enzymes [BR:
aanr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCTC52924_01962 (dnaE_2)
DNA replication proteins [BR:
aanr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCTC52924_01962 (dnaE_2)
DNA repair and recombination proteins [BR:
aanr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCTC52924_01962 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
XHP74208
LinkDB
All DBs
Position
2340729..2343713
Genome browser
AA seq
994 aa
AA seq
DB search
MYINCHSYYSLRYGVLSVSQLLELAKLNGVNEMALTDINSTSACLEFIKEAPMYGIRPIV
GADVRNVNDRCYVSLAKNNGGFLELNQFLTKHLHTGTKFPEVPPSFQNVISIIPFEKVLE
YEMESFAPDWYIGISVAELNKLKFSRLKEFRNKLVLLQPVTFCKQTHMNIHRLLRCVDHN
IVLSKLPESEQGSKKDRMYPISELYELFEGFEGILDNTKRVMGQCSVRFNFDEERENQNQ
TTYLDSSGEDFDLLLALVNERKHTRYKVLTKQITDRIKRELDAIQQMDFVSYFLINYDIL
QYAIKNDYPYIGRGSGANSVVAYILGITNVDPIELDLYFERFINSYRSSPPDFDIDFSWK
DRDDVTRYIFERFPYTALMGTYVTFQYRAVVRELGKVFGLPKAEIDDFLKGNNLHSKNDH
YFKLVAKYGQLIHGFPNYLSVHSGGIVITKQPVQAYCATFMPPKGFQTLQIDMHIAEKVG
IFKFDILAQRGLSKIKDAIELVRTNQPNAKLKDLNDTDFFKNDPAINNLLKTGDCMGVFY
VESPAMRTLMTRLQTQGYLGLVAASSIIRPGVTNGGMKNAYIERHRFPEKRTEAHPVLLA
IMADTYGVMVYQEDVLKVAHYFAGLSLAEADVLRRGMSGKGRSKEQFDALEKKFYENCKD
KGYEPKVIVEVWDQIKAFAGYAFAKGHSASYAVESYQSLYLKKYFPLEFMTSVLNNGGGF
YNYDTYINEILRCGGMVENPCINHSDHGNTIKGKTVYLGFGIVKNLEHRCIQRILNERQL
YGDFKDFNDFLERCRIGLEQLMLLIRINAFRLFEPNKQRLMWNAHMDENSIRSKSPQPQL
FKPKRINYNLPVLKGDSIIDAYDNLELMGFTLQNNFSLIRPGKYPITLEKDFKHNVGKRI
TIVGKLVTSKTTKTSKGDHMAFSTFLDLEGICFDSVQFPKIRAKYALKGIGIYWIKGMVT
EDLGYYAITTEELYRVPVIPDPRYSEEQKTQKNI
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaattgccactcctattattccctacgctatggggtgctctctgtttcacaa
ttattggaacttgcgaagctgaatggcgtcaatgaaatggcattgaccgatatcaacagt
acttctgcctgtttggaatttataaaagaagcgcctatgtatggaataagacctatagtg
ggtgccgatgtccgcaatgttaatgaccgctgttatgtaagtttggcaaagaacaatgga
ggctttttggaactgaaccagtttctgacaaaacaccttcatacgggcaccaaattccca
gaggtgccgccctcatttcagaatgtgatcagtataattccatttgaaaaagtgttggaa
tatgaaatggagagtttcgccccggattggtatataggtatttctgtagcggagctgaac
aaactgaagttttcgcgtttgaaagaatttagaaataaattggttttgttacagcctgta
acgttttgtaaacaaacccatatgaacattcataggcttttaagatgtgtagatcataac
atcgtcttgagcaagctaccggaatcggagcagggaagtaaaaaggataggatgtacccc
atttctgagctttatgaattatttgaaggttttgagggtattttggataataccaaacga
gtgatgggacaatgttccgttaggttcaattttgatgaagagcgggaaaatcaaaaccaa
accacctatttagattccagcggggaagatttcgacttattgcttgccttggtaaacgag
cgaaagcatacaaggtataaagttttgaccaaacaaataaccgatcgaataaaacgagag
ttggacgccattcaacaaatggattttgtatcctatttccttattaattatgatattcta
caatacgctattaaaaatgattacccctatataggtaggggaagcggtgccaatagcgta
gtggcctatatacttggtatcaccaatgttgatccgatagaactggatctttatttcgaa
cgctttatcaattcgtatcgttcttccccgccagactttgacattgatttttcttggaag
gacagggacgacgttacccgctatatttttgaacgttttccctataccgccctaatggga
acgtatgttacttttcagtatcgagcggtggtacgggaattggggaaagtatttgggttg
ccgaaagcggagatagatgattttctaaaaggaaataatctgcatagtaagaacgaccat
tattttaagttggtcgcgaaatatggacagctgatccatggttttccaaattacctgagt
gtgcattcaggggggatagtcatcaccaaacagcccgtacaggcctattgtgcgactttt
atgcccccaaaaggatttcagaccttacagatagatatgcatattgcggagaaggtagga
atattcaaatttgatatcttggcccaacgtggactttctaaaattaaggatgcaatagaa
ctggtaaggacgaaccagccaaatgccaaattaaaggatctaaatgatacggattttttt
aaaaacgatcctgccataaataatttattaaaaacgggggattgcatgggtgttttttat
gtagaatccccagctatgcgcactttgatgacgcgcttacaaacacagggttatctaggg
ctggtagcagcgagctctattattagaccaggggtgaccaatggtgggatgaagaatgcc
tatatagaaagacatcgttttccggagaaaaggacagaggcccatcccgtgcttttagcg
attatggcagatacctatggagtaatggtctatcaagaggatgtgcttaaggtagcgcat
tattttgctggccttagccttgcggaagcggatgtattgcgaagagggatgagtggaaaa
ggtaggagcaaggagcagtttgatgccttggaaaaaaaattctatgagaactgtaaggat
aagggatatgaacctaaggtgatagtagaggtctgggaccagataaaagcgtttgcagga
tatgcttttgccaaaggccattctgcttcttatgcggtagaaagttatcaaagcttatat
ttaaaaaaatatttcccgttggaatttatgacctccgttctcaataacggcggcggtttt
tataactacgatacttatatcaatgaaatattacgctgtggaggaatggtcgaaaaccca
tgcatcaaccatagtgatcatggcaataccataaaaggtaaaactgtttatctgggattt
ggcattgtgaagaatcttgagcacagatgtatccaacggatcttaaatgaacgacaattg
tacggggattttaaagatttcaatgattttttagagcgttgtagaataggtctggagcaa
cttatgttattgatacgcatcaacgcatttagactctttgaaccgaacaaacaaagattg
atgtggaacgcccatatggatgaaaattctatcagaagcaagagcccacaaccacagttg
tttaaacctaaaagaataaattacaatttacccgtgttaaagggcgattcaattatagat
gcctatgacaatctggaattaatgggatttacactgcaaaataatttttcattgatccgc
cctggcaaatatcccataaccttggaaaaggattttaagcacaatgtgggcaaaaggatt
actattgtgggaaaacttgttacctctaaaaccacgaagacgtccaagggagaccatatg
gcattttccacatttttggatctagaaggaatatgttttgacagcgtacaatttcctaaa
attagggccaaatacgctctgaaaggaattgggatatattggatcaaaggtatggtcaca
gaagatttagggtattatgcaattaccacggaagagctttatagggtacctgtaattcca
gaccctcgatattctgaagaacaaaaaacccaaaagaatatttag
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