Arenibacter antarcticus: KCTC52924_02185
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Entry
KCTC52924_02185 CDS
T10841
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCTC52924_02185 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aanr03019
]
KCTC52924_02185 (pnp)
03016 Transfer RNA biogenesis [BR:
aanr03016
]
KCTC52924_02185 (pnp)
Enzymes [BR:
aanr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KCTC52924_02185 (pnp)
Messenger RNA biogenesis [BR:
aanr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KCTC52924_02185 (pnp)
Transfer RNA biogenesis [BR:
aanr03016
]
Prokaryotic type
tRNA degradation factors
KCTC52924_02185 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
XHP74430
LinkDB
All DBs
Position
complement(2593801..2596020)
Genome browser
AA seq
739 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDDDVMPDAMAGLAASAAIQLSDLPFECPISEARVARVNGEFVINPTRTQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMAEAIKFAHEAIKVQCAAQVKLAEAFGKKEVREYDAERT
DEDLAKKIHEMAYDKVYAIAKAGSSKQERTAAFDAIKEEIKASFPEEELADLGGMISKYY
YKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSRDANQIDMPSFEGEERFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMIPA
DCPYTVRVVAEVLESNGSSSMATVCSGTMALMDAGVQLIKPVSGIAMGLISDADSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQARTGRLHILEKI
TETIAAPAADVKAHSPKMVTRRIPNEFIGALIGPGGKVIQEMQKETGTTIVINEDPVTEE
GIVEILGVGQEGINAVLAKIDSILFKPEVGSIYEVKVIKMLDFGAVVEYADAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGVDPRTRKEKVSRKAILPKPEGFVERPPREDRG
RNDRGNDRNRDRDRKPRRD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgataccaaaagtatttagggaggtcatagaccttggtgacggtagggaaatttctatc
gaaaccggaaaattggcaaagcaggcccatggttctgttgttgtacagtcaggaaaatgt
atgttattatgtacagttgtttccaattacaaacaaagtgatgtggattttcttccactt
accgtggattaccgtgaaaaatttgcggcatccggacgttacccaggcggtttctttaaa
agagaagcaagacctagtgatggcgaagtattgaccatgagattggtagaccgtgttttg
cgtccacttttcccaaaggattatcatgctgaaactcaggtaatgatccaattaatgtca
catgacgatgacgttatgccagatgcaatggcaggtttagccgcatctgcagctattcaa
ttatcagatttacctttcgaatgccctatttctgaagcacgagttgctagagtaaatggc
gaattcgtaatcaatccaacacgtacgcaattagcagaatctgacatcgatatgatgatt
ggtgcttctgccgattcagtaatgatggtggaaggggaaatggatgagatttctgaagaa
gaaatggctgaggccattaagtttgctcacgaagcaattaaagttcaatgtgctgctcaa
gtaaaattagcagaagcatttggaaaaaaagaagttcgtgaatacgacgcagaaagaact
gacgaagatttagcgaagaagatccatgaaatggcctatgacaaggtatacgccatagcc
aaagctggttcttccaaacaagaaagaactgctgcctttgacgcaattaaggaagaaatt
aaagcttcttttcccgaagaagaattagcagatttaggaggaatgatctccaagtattac
tacaaagcagaaaaagccgcagtgagggaccttaccctaaacgaaggcctgcgtttggat
ggtagaaaaacagatgaaattagaccgatctggtgtgaggtagattacttaccttctaca
cacggttctgcaatctttactcgtggagaaacccaagccttggcaacggttactttagga
acatctagagatgccaaccaaatagatatgccctcgtttgaaggtgaagagcggttttac
ctacactataacttccctcctttctctacaggtgaagcaagaccaattcgtggaacatct
cgtagagaagtaggccatggtaatttagcacaacgcgccttaaaaggaatgattcctgca
gactgtccttataccgttcgtgtagtagcggaagtattggaatctaacggttcttcttct
atggctacagtttgttcaggtacaatggcactaatggacgctggtgttcaattgataaag
ccagtttctggtatcgccatgggattgatttctgatgctgattctggaaaatacgcagta
ctttctgatattttaggtgatgaagatcacttaggagatatggactttaaagtcacagga
actgctgatggtattacagcttgtcaaatggacattaaagtaaaaggtttatcctacgaa
attttagtgaatgcactaaaacaagcacgtactggccgtttacacatcttagagaagatc
accgaaacaattgccgctccagctgctgatgtgaaggcacattctccaaaaatggttact
agacgtatccctaatgaattcattggtgcgttaattggacctggtggaaaagtgattcag
gaaatgcaaaaagaaactggaactactattgtaatcaatgaagatccagttactgaagaa
ggaatcgtagaaattttaggagtaggacaagaaggtattaatgctgttttagcaaaaata
gattctattttatttaagcctgaagtgggtagcatatacgaagtaaaagttatcaaaatg
ttagattttggtgccgtggttgaatacgcagatgctcctggcaacgaagtattgcttcac
gtgtcagaattggcatgggaacgaaccgaaaatgtttccgatgtagttaacatgggtgat
gtattcgatgttaaatactttggggtagatccaaggactagaaaggaaaaggtatctaga
aaagctattttacctaaaccagaaggttttgtggaaagaccaccgcgagaagatcgtggt
agaaatgataggggaaacgatagaaatagagatagagatcgtaaaccaagaagagactaa
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