Arenibacter antarcticus: KCTC52924_03849
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Entry
KCTC52924_03849 CDS
T10841
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aanr Arenibacter antarcticus
Pathway
aanr03420
Nucleotide excision repair
aanr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aanr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTC52924_03849 (pcrA_2)
03430 Mismatch repair
KCTC52924_03849 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aanr03400
]
KCTC52924_03849 (pcrA_2)
Enzymes [BR:
aanr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTC52924_03849 (pcrA_2)
DNA repair and recombination proteins [BR:
aanr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTC52924_03849 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
KCTC52924_03849 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
XHP76081
LinkDB
All DBs
Position
complement(4554260..4556581)
Genome browser
AA seq
773 aa
AA seq
DB search
MENYINELNEAQKAPVLHKDGPLMVIAGAGSGKTRVLTYRIAYLMSKGVDAFNILSLTFT
NKAAREMKKRISDIVGSSEAKNLMMGTFHSVFAKLLRFDGDKLGYPSNFTIYDTQDSQRL
LSAIIKEMGLDKDIYKYKQVQNRISSYKNSLITVKAYYNNPDLLEADAMAKKPRMGEIYQ
NYVDRCFKAGAMDFDDLLLRTNELLTRFPEVLSKYQNRFRYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYSFRGANISNILNFQKDYDNVGMYRLEQNYRSTRNIVNAANS
IIANNKNQLEKVVWTSNEDGPMIKVHQSPTDAEEGRFVAGSIFEHKMQEQLPNGNFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRIINFP
ARGIGQSTMDKLTVAANHYNRSIFEVIENLDRIDLKINSGTKRKLGDFVTMIKSFQIMNE
SADAFVLSEHVAKKTGVLLEFKKDGTPEGIGKMENIEELLNGIKDFVEGQRELADAKADI
GEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSMSTRNE
LEEERRLFYVALTRAEKQAYLTFAQTRYRWGKLVDAEPSRFIEEIDEKYIENLTPIKSHR
YTPLIDVDIFGDMDKSRLRQIKPMKGTPPSGNSPNENQLRKLRKLKPELGVPVGNTNSVD
PNLSEGSLVNHTRFGRGQVIKIEGVGNDKKAEIKFDKGDIKKLLLRFAKLEVL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggagaattatataaatgagttaaatgaggcccaaaaggctcccgtccttcacaaagac
ggtcccttaatggtgattgccggcgctggttcgggaaagactagggtgctgacctatcgt
attgcctatcttatgagtaagggggtagatgcctttaatatcttatcactgacctttacc
aataaggcagcacgggaaatgaagaagcgtatttccgatattgtaggatcctcagaggcc
aaaaatttgatgatgggaaccttccactccgtctttgctaagcttttacgttttgatggg
gacaagttgggatacccgagtaattttacgatttacgatactcaagattctcagcgactc
ctttcagcgataataaaggaaatggggctggataaggatatctataaatacaaacaggta
cagaacaggatatcgtcctataaaaacagtcttattaccgtaaaggcatattataacaac
cccgaccttttagaggccgatgccatggccaaaaaaccgcgaatgggtgagatataccag
aattatgtggatcgatgctttaaggctggggcaatggattttgatgatttattgttgcgt
accaatgagttgcttacccgttttcctgaagtattgtccaaataccagaatagattcagg
tatattttggtagatgagtatcaggataccaaccattcccaatatttaatcgtcaaggca
ctgtccgacaaattccagaatatttgtgtggtaggggatgatgctcagagtatttattcg
tttaggggggctaatatcagtaatatcctaaactttcagaaggattatgacaatgtaggt
atgtaccgtttggaacagaattacaggtctactcggaatattgtaaatgcagccaactcc
ataattgcaaacaataagaaccaattggagaaggtggtttggacctctaatgaggatggt
ccaatgatcaaagtccaccagagtccaaccgatgcggaagagggtaggtttgtggccggc
tcaatttttgaacacaaaatgcaagagcagttacccaatggtaattttgcggtactctac
aggactaactcgcaatctagggccattgaggatgcgttgcgtaaacgggatattccctat
aggatttatggcggactatcattttaccaacggaaggaaataaaagatgtactttcctat
ttaagattggtgattaaccctaaggacgaggaggcgcttaagcgtatcataaactttcct
gctagaggaataggacagagtaccatggataaactaaccgtggccgctaaccattataac
cgatcaatttttgaggttatagagaatttggaccgtatagacctaaaaataaattctgga
acaaaaagaaaattgggcgatttcgtgaccatgatcaaaagttttcagattatgaacgaa
agtgcagatgcttttgtcctgtcagaacatgttgccaaaaaaacaggggtgctgttagag
tttaaaaaggacggtacgccagagggaattggcaaaatggaaaatatagaggagctgctg
aacgggataaaagactttgttgagggacaaagggagttggccgatgccaaagcagatata
ggggaatttttggaagatgtggccctggctacagatttggacaaagatactggtgatgat
gatcgggtagccttaatgaccattcatttggccaaaggattggagtttccttatgtgtat
gtcgtaggaatggaagaggatctatttccttctgccatgagtatgagtactagaaatgaa
ctggaagaagaaagaagattgttttatgttgctttgacacgggcggagaaacaagcctat
ttaacctttgctcaaacccggtaccgatgggggaaattagtagatgcagaacctagtaga
tttatagaggaaatagacgagaaatatatagaaaatttaactcctataaaaagtcacagg
tatacgcctttaatagatgtagacatttttggcgatatggataaaagtaggttgcgccag
ataaagcctatgaaagggacaccaccaagtggcaattcccctaatgaaaaccaattgcgc
aagctgcgtaagttgaagcccgaactaggcgttcctgtaggcaacaccaattcggtagac
cccaacctatccgagggttctttagtaaaccacactagatttggtaggggccaagtgata
aaaatagaaggtgtaggaaatgataaaaaagcggagataaaattcgataaaggcgatatt
aagaagttgttgctccgctttgccaagttagaggtactctaa
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