Argentina anserina (silverweed cinquefoil): 126781943
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Entry
126781943 CDS
T10558
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126781943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126781943
03036 Chromosome and associated proteins [BR:
aans03036
]
126781943
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126781943
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126781943
PBAF complex
126781943
GBAF(ncBAF) complex
126781943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
126781943
NCBI-ProteinID:
XP_050363026
LinkDB
All DBs
Position
2:5918320..5924005
Genome browser
AA seq
1011 aa
AA seq
DB search
MEEKRGDAGTQPLANADSPSTTEPTSSRRRAGGQKRKASSLGGSASSSTPSKRMTREKAS
LSHLPIHNGPLTRARQGPSSHSSASAAAAKPAAQTKRPEPSTVEAEQAKREEELEALEAA
MEAEFEAIRSRDANAHVVPSHCGWFSWTKVHSIEERMLPSFFDGKSDTRTLETYLEIRNC
IIKKFREDPGTLVELKDMLELKVGDFDSRQEVMEFLDHWGLINFHPFPPTGSSVANVNSD
EVTERDSLVDKLYHFEALESRSSLVPKTNLTTPTVASGLFPESIIAEEMVRPEGPAVEYH
CNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSGMSSSDFILMEPAEAPGVSGGNWTD
QETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDHDDDLVASAKETA
DPTSTNDESLPSKDAPETIENKTSADASDPQDSPMEIPKEEASEVKDGEDTSKPEDETGV
KVDQETPKLEDSQDTDDLKLDEETDENLALKALKEAFEVVGYPQTPECQLSFADVGNPAM
ALAAFLARLVGPENAIASAHNSLKSISADSPGIELASRHCFLLEDPPNERKEQAGRDSVS
VEREALSDKVDEENSHKEDNSTSVLEDKGVSNDNNDKKLEEVTPEEKSQSAKEQDDKVAP
EEVGTDKLNKSNNSKLSNDPSPTLEESDGSKVEAPPSSVKDSGEGTSVGNHSETTETLMD
VDMSDSIPSTKTKPQQGVASSSAEQPSQSTETSKEVDDSNILASERDEAPPQVTIESEAP
PQPTDTSKDVDMVCDTQPAQDNELPQPVENTTSEDRADDSKHEKHGCTDLKNDKKQETKG
EQKIDKIKQAAVSAVSAAAVKAKLLAEQEEDQIRQLAAMLIEKQLHKLEAKLGFFNEMES
VVMRVKEQLDRSRQKLYHERAQIIAARLGLPGSSSRGMPSAMPANRMAMNATNSVPRPPL
MMASQRPPMLRPMGAVPPTPLNQFSGSNLSGSPIRPPNRDRLDSLSSIGSK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagcgcggcgacgccggaactcagccgctggctaacgccgactctccgtcc
actaccgagcccacttcatcccgacgccgcgccggaggccaaaagcgaaaggccagcagc
ctcggcggctcggcctcttcatcaacgccgtcgaagcgcatgactcgcgagaaggcttca
ctctctcacctcccgatccacaacggcccactgacgagggcccgccaggggcctagtagc
cactcctcggcctcagccgcggcggcgaagccggctgctcaaacgaagcggccggagccg
tcgactgtggaggcggagcaagcgaaaagggaggaggagttggaggctttggaggcggct
atggaagctgagtttgaagctataagatctcgtgatgccaatgctcatgtggttcccagt
cactgtggttggttctcgtggacaaaggttcactccattgaggagcgtatgttgccgtca
ttctttgatgggaagtctgatactagaactctggagacatacttggagatacgcaattgt
attataaaaaaattccgtgaggatccggggacattggttgaactgaaggatatgttggag
cttaaagtcggagactttgattcgaggcaagaagtgatggaatttttggatcattggggt
ttgataaactttcaccctttcccaccaacgggttctagtgttgcaaatgtcaacagtgat
gaggtgacagagagggattctttggtagataagttgtatcactttgaagcactagagtca
cgatcatcactagtacctaagactaacttgacaactccgactgtggcatctgggctgttc
ccagagtctataattgctgaagagatggtgaggcctgaggggccagctgtggagtaccat
tgcaactcttgttcggctgattgctcgcgcaaacgctaccattgccagaagcaggcggat
tttgacctgtgttctgagtgctttaacaatgggaaattcgactcgggtatgtcttcatca
gattttattcttatggagcctgctgaggctcctggggtaagtggtggaaattggacagat
caggagaccctccttctgcttgaagcattagaattatataaagaaaactggaatgagatt
gctgaacatgttgctacaaaaacaaaagctcagtgtattttgcactttgttcaaatgcca
attgaggatacctttctagatcatgatgatgatcttgttgccagtgccaaagaaactgca
gatccaacttcaactaacgatgaatcattgccctccaaagatgcccctgaaacaatagag
aataagacaagtgctgatgcgagtgaccctcaagattccccgatggaaattcccaaagaa
gaagcaagtgaggtgaaagatggggaggatacttcaaagccagaagatgaaactggagtc
aaagttgatcaggaaaccccgaagttggaagacagtcaagacactgatgatttgaaactt
gatgaggaaacagacgagaaccttgcattgaaggctcttaaagaagcctttgaagttgtt
ggttatcctcaaacacctgaatgtcaactctcatttgcagatgtgggaaaccctgccatg
gcattggcagcattcttggcacggttggtgggacctgaaaatgctattgcttcagcacat
aattctttaaaatccatatctgcagattctcctggcatcgagctggcttctaggcactgc
tttcttttggaagatcccccaaatgaaagaaaggaacaagctggtcgtgatagtgtttct
gttgaaagagaagctctgagtgacaaagtagatgaagaaaatagtcataaagaggataac
tccacctcagttttggaagataaaggtgtatcaaatgataataatgacaagaaactagaa
gaagttactcctgaagaaaagtcgcagtctgcaaaagaacaagatgacaaggtcgctcct
gaggaagtcgggactgataaactaaacaaatcaaacaactcaaagttatcaaatgatcca
tcacctactttggaggagtcagatggttcaaaagttgaagcaccaccaagttcggtaaag
gattcgggagagggaacttcagtaggaaatcattctgaaaccacagaaacactgatggat
gtggatatgtccgactccattccctcaacaaagacaaagcctcagcaaggagttgcatca
agttcagctgagcaaccttcgcaatctacagagacatcaaaagaagtggatgattctaat
attctggcttcagaaagagatgaagccccaccacaagttactattgaatcagaagcaccc
cctcaacctacagatacatcaaaggatgtagatatggtgtgtgatactcaacccgcacaa
gataatgagcttccccaaccagttgaaaacactacaagtgaggatcgagctgatgatagt
aaacatgagaaacatggctgtacagacttgaaaaatgataaaaagcaagagacaaaaggc
gaacagaaaatagataaaataaagcaagctgcagtttctgcagtctcagcagctgctgta
aaggcaaaacttctagcagaacaggaagaagatcaaatccgtcagcttgcagccatgttg
atagagaagcagttgcataagttagaagccaagttgggtttctttaatgagatggaaagt
gttgtgatgagggtgaaagagcaattagacaggtcaagacagaagctctaccatgagcgg
gcacagataattgctgcccgacttggcttaccaggttcctcttctagaggaatgccatct
gcaatgcctgccaatagaatggccatgaatgctacaaactcagttccaaggcccccactt
atgatggcctcacagagaccacccatgttgagacccatgggcgcagtgcctccaacccct
ttaaaccaattttcgggctccaatttgtcgggaagtccaattcggcctcccaatcgggac
aggctggacagcctttcttctattgggtcaaagtaa
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