Argentina anserina (silverweed cinquefoil): 126782166
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Entry
126782166 CDS
T10558
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126782166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126782166
03036 Chromosome and associated proteins [BR:
aans03036
]
126782166
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126782166
Coactivators
SAGA/TFTC/STAGA complex
126782166
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126782166
STAGA complex
126782166
TFTC complex
126782166
SAGA complex
126782166
SLIK complex
126782166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_DCAF12
PALB2_WD40
WD_LRWD1
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
126782166
NCBI-ProteinID:
XP_050363305
LinkDB
All DBs
Position
2:complement(30022331..30027568)
Genome browser
AA seq
693 aa
AA seq
DB search
MEEEQLEKFVTDFLKKKGLRALPDEVNQSANTPGASQFDPDVVRQILAFSGFQDAPARYQ
DEYAKLRSWACTSLDLYRHELLRVLYPVFIHCFMDLVAKGHIQEARTFFSSFREDHEMMH
LRDLHKLEGVLSPSHLQEMEFAHSLRQSKVNIKICQVTFCFFLLCLTVYRAQPPSYVCGQ
LSFQYSYELLLQFLHKSQSTTMLGIINEHINFQVSPGQPSSITDDAEAVTLTGGSQESAN
QINQKEIHWGLLEDSLEERLEKVSEMALDSERAEGEPKEGEADESKKKSIEVGKQGASIK
KQKKDKAVSAIAKSARPEATPVPTAPRVKPELTLPVIPPEVEQSILEDLRNRVQLSSAAL
PSVSFYTFINTHNGLNCSYISHDGSLVAGGFSDSSLKVWDMAKIGQQSVGSDLQGENGTA
SSEQVAGSNGGKRPYTLFQGHSGPVHSATFSPLGDFILSSSADSTIRLWSTNLNANLVCY
KGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHSNCNY
IATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGSIMMWDLSTG
RCVTPLMGHTSCVWTLAFSGEGSLLASGSADCTVKLWDITASTKLPKAEENRSGSASRLR
SLKTLPTKSTPVYSLRFSRRNLLFAAGVLSKTV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagcagcttgagaaattcgtaacggacttcttgaagaagaaagggctgagg
gctctcccagatgaagttaaccagtccgcaaatacccccggggcctctcaattcgacccc
gacgtcgtcaggcaaatcctcgccttctccggatttcaggatgctcctgcacgctaccaa
gatgaatatgccaagttgaggtcgtgggcttgtacttctctagacttgtacaggcatgag
ttgctccgtgttctttaccctgtttttattcattgtttcatggatctcgttgctaagggc
cacattcaagaagcgaggacatttttcagtagcttccgcgaagaccatgaaatgatgcac
ctgcgagatctacacaagttggaaggagttctttctccctctcatctgcaggagatggaa
tttgctcattctcttaggcagagcaaagtgaacatcaagatatgtcaggtaactttctgc
ttctttttactgtgtctgactgtatatagagctcaaccaccctcttatgtttgtggtcaa
ttgtccttccagtactcctatgagcttctgctgcagttcttgcacaagtcacagtccacc
acaatgcttgggattatcaatgagcatattaatttccaagtttctcctggacaacccagc
tcgattactgatgatgcggaggctgtaacacttacaggaggcagccaggagtcggctaat
caaataaaccagaaggaaattcattgggggttgcttgaagattcgttggaagaacgcttg
gaaaaggtcagtgaaatggctttagattctgaaagagctgaaggcgaaccaaaagaaggg
gaggctgatgaaagtaagaagaaatcaattgaagttggtaaacagggtgcttctatcaaa
aaacaaaaaaaggacaaggctgttagtgcaatagcgaaaagtgcacgccccgaggcaacc
cctgtacctaccgcaccacgagtcaaaccagaacttactttgccagtaattccaccagaa
gttgaacagtctattcttgaggacttgagaaaccgtgtacagttgagtagtgctgcgcta
ccatccgtcagtttttatacttttatcaacacacacaatggtttgaactgttcatatata
tcccatgacggatccctggttgccggtggattttctgactcatcgctgaaggtctgggac
atggcaaagattgggcaacagtctgttggttcagatctgcagggtgaaaatggcacggct
tcaagtgaacaagttgctgggtcaaatggcgggaaaagaccatacacattgtttcagggt
cattcagggccagttcattctgctactttcagtcctcttggtgacttcatactttcgtct
tcagcagactcaactattcggttgtggagtacaaacctaaatgctaatcttgtttgctac
aagggtcataactaccctgtatgggatgttcagtttagccctgtaggtcattattttgcc
agtgcttcacatgatagaacagcaagaatttggtctatggacagaatacagcctttaaga
ataatggcagggcacttatctgatgttgattgtgtacaatggcattccaactgcaattac
attgctactggttctagtgacaaaacagttagattatgggacgttcagagtggagagtgt
gtccgaatattcattggccacaggagtatgattttatctctagcaatgtcacctgatggc
cgatatatggcttcgggtgatgaagacggctcaatcatgatgtgggatctttcaactggc
cgctgcgttacacctttgatgggtcatacatcatgcgtatggacattggctttcagtggt
gaaggttcactccttgcttctggatctgctgattgcacggttaaattatgggacataact
gcaagtacaaagttgcccaaggctgaagaaaacagaagcggaagtgctagcagattgagg
tcattgaagactttaccaaccaagagtacgcctgtctactccttaaggttttctcgaagg
aatcttctgtttgcagcaggggtcctttcaaaaactgtttaa
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integrated database retrieval system
