Argentina anserina (silverweed cinquefoil): 126782240
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Entry
126782240 CDS
T10558
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126782240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126782240
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126782240
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126782240
BRITE hierarchy
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
OapC
Motif
Other DBs
NCBI-GeneID:
126782240
NCBI-ProteinID:
XP_050363410
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Position
2:20880384..20883355
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AA seq
328 aa
AA seq
DB search
MRGLQLSLNQTQKLRLQRALEKLESLSSKPNSNASVIVADSIPVNHEDGLLKGHGTSEVN
GEVVATVCGVVERVNKLVYVRSLRARYKPEVGDILVGRVIEVAPKRWRVEINFSHDAVLM
LSSMNLPNGIQRRRTALDELNMRTIFEENDVICAEVRGFQYDGLHLQARSQKYGKLGRGQ
MLTVPPYLVKRRKQHFHNVEKYGIDLILGCNGFIWVGEHVEVTDDMVVDQVNNSEQQSAK
SDKEILSLEEQERNYTTQETRENICRIANAIRILSTLGFSITVEVIMDTVELSISLKQQV
PIYEMLGAEFCVLVAEKEAARRSVNKKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagagggttgcagctctccttgaaccaaacccagaagcttcgtcttcagagagctctc
gaaaagctcgaatctctctcctcaaaacccaattccaatgcttctgttatcgtcgccgac
tccatccccgtcaaccacgaagatggacttctcaaggggcacgggacgtctgaagttaac
ggtgaggttgttgcgacggtctgcggcgtcgtcgagagggtgaataagctggtttatgtg
cggtcattgagagctaggtataaaccagaggttggagatattcttgtagggcgtgttatt
gaggttgctccgaaacgttggagagtagagataaactttagccacgatgctgtgctgatg
ctttcttcgatgaacttacccaatggcatccagaggcgtcgaactgctttggatgaattg
aacatgcgcactatttttgaagagaacgatgtcatttgtgctgaagttcgcggttttcag
tatgacggtttacatctccaagcaagaagtcagaagtatggaaagcttggaaggggtcaa
atgctcacagtccctccttatctagtgaaaagacgcaaacaacactttcataatgtggag
aagtatggaattgaccttatccttggctgcaatgggttcatttgggttggtgagcatgta
gaagttacagatgatatggtagttgatcaagtgaacaattctgaacaacaaagtgcaaaa
tctgataaagaaattctaagccttgaagagcaagaaagaaattacactacccaggagaca
agggagaacatctgcaggattgcaaatgctattcgcatattgtctactttaggctttagt
attacagttgaagtgattatggacacagtcgagttgagcatttctctgaagcaacaggtc
cccatatatgaaatgcttggtgcagagttctgtgttcttgtcgcagaaaaggaggctgca
aggagaagcgtgaataaaaagaaatga
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