Argentina anserina (silverweed cinquefoil): 126782256
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Entry
126782256 CDS
T10558
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126782256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126782256
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126782256
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
126782256
NCBI-ProteinID:
XP_050363428
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Position
2:21296330..21299670
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AA seq
583 aa
AA seq
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MLRMASSFPEEVLEHVFSFLHSDGDRNSISLVCKSWYEIERWCRGRIFVGNCYAVSPRIL
IRRFPNVRSITLKGKPHFADFNLVPEGWGGYVYPWIAALAGAYPWLEEIRLKRMVVTDEC
LELIAKSLKSFKLLVLSSCEGFSTDGLAAIAANCRNLRELDLHESYVEDPSGHWLSHFPD
TYTSLVSLNIACLGSEVNFAALERLVGRCPNLRSLRLNRAVPLDKLSNLLNRAPQLDELG
TGAYSTELRPDDLSNLSSALSACKKLKSLSGFWDVVPTNLPALYHICPRLTSLNLSYAII
QSPDLIKLVSQCPNLQRLWVLDYIEDVGLETLAASCKDLRELRVFPSDPFVLEANVSLTE
QGLIAVSEGCPKLRSVLYFCRQMSNEALITIARNQPNFTCFRLCIIEPRTPDYLTLEPLD
VGFGAIVEHCKDLRRLSVSGLLTDRAFEYIGTYGKKLEMLSLAFAGESDLGLHHVLSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKLPQLNVEVIDER
GHPNTRPESCPVEKLYIYRSVAGARVDMPDFVWTMDDSAVRLV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgagctcgttcccggaggaggtgctggagcacgtgttctcgttcctg
cactcggacggcgaccggaactcgatctcgctggtgtgcaagtcgtggtacgagatcgag
cggtggtgccggggcaggatattcgtcgggaactgctacgccgtcagccccaggattctg
atcagacggttcccgaacgtgagatccataacgctcaaggggaagcctcacttcgccgac
ttcaatctggtcccggagggctggggtggctacgtgtacccctggatcgccgccctggcc
ggtgcttatccttggctggaggagatcaggctcaagaggatggtcgtcaccgacgagtgc
ttggagctgattgctaagtcgttaaagagtttcaagctgcttgtgctttcgtcctgcgag
ggcttcagcactgatggcctcgccgccattgccgctaattgcaggaatttgcgggagttg
gatttgcatgagagttatgtggaggacccgagtgggcattggcttagtcattttcctgat
acctacacgtcacttgtctctcttaacattgcatgcttgggttctgaggttaattttgct
gccctggagcgcctggtgggtaggtgtcccaaccttaggagtctcaggctcaaccgtgcg
gtgccccttgacaagctatccaatctacttaaccgtgcgcctcagctggatgagttgggg
acaggtgcctactcaacggagttgcgacctgatgatttgtcaaacttgtcaagtgccctc
tcggcctgcaagaaactcaagagcttatctgggttttgggatgtggttccaactaatctt
ccagctctgtatcatatctgccctcggttaacatctctgaatttgagctacgccattatt
caaagtcctgaccttataaagcttgttagccaatgcccaaatttgcagcgtctttgggta
ttggattacattgaagatgttggccttgaaaccttggcggcgtcttgcaaggatcttcgg
gagctgagggtgtttccatctgatccgtttgtgttggaagcaaatgtgtccttgacagaa
caaggcctcattgctgtttccgagggttgtccaaagctgcggtcagttctgtacttctgc
cgacaaatgtccaatgaggcattgatcaccattgcgaggaatcaacctaactttacttgt
tttcgcctttgcataatcgagccccgaactcccgactatcttacgcttgaaccacttgat
gtgggtttcggggccattgttgagcactgcaaggatctccggcgcctgtctgtttctggc
ctgctaactgatcgtgcatttgagtacataggaacttatggcaaaaagttggagatgctt
tctctagcctttgctggggagagtgacttgggacttcatcatgtgctgtcggggtgtgat
aatcttcggaaacttgagattagggattgtccttttggtgacaaggctcttttggccaat
gctgcaaaactggagacaatgcgatccctttggatgtcttcttgctcagtaagttatgga
gcatgtaagctgctaggccagaagctgccccaacttaatgttgaagttattgatgagagg
ggacaccctaacacaaggccagagagctgtcctgttgagaagctctatatatacaggtct
gttgctggtgcaagggttgacatgcctgactttgtttggactatggatgactctgcagtg
aggcttgtatga
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