Argentina anserina (silverweed cinquefoil): 126782523
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Entry
126782523 CDS
T10558
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126782523
04121 Ubiquitin system [BR:
aans04121
]
126782523
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126782523
Membrane trafficking [BR:
aans04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
126782523
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126782523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
CxC4
zf-Nse
Rad50_zn_hook
Zn_ribbon_6
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
126782523
NCBI-ProteinID:
XP_050363735
LinkDB
All DBs
Position
2:complement(28859799..28861874)
Genome browser
AA seq
308 aa
AA seq
DB search
MSSGRNTHWCYRCRRPTQLQGQDAVCRNCSGGFVQELDDMVHISSLDFFGPQNDEDHDRR
FGFMEAFSAWQQLADRRGDIVRGRSDLVPEHSPGFSPLLIFGGQIPFRLSGNGAFEALFN
GSPGVGVTRGNVGDYFVGPGLEELFEQLSANDRRGPPPASRGSIDAMPTIKITNKHLRSD
SHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELNPQGSASGRNENS
RSRSSGNTSGRETGRESQGRRNPFSSLWPFRASSSSSSSNRNPPHESSPPTARENRNEME
YSGWPFDY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcggtcgaaacacccattggtgctataggtgcaggcggccgactcagctgcaa
gggcaagatgcggtctgccgaaactgcagtgggggatttgttcaagaacttgatgacatg
gttcatatcagctcactggatttctttggacctcaaaacgatgaggatcatgatagacgg
tttgggttcatggaagctttctcagcttggcagcagttggcagacagaagaggtgatatt
gtgcggggtcgatcagatttagttcctgaacattccccggggttttcccctttgttgatt
tttggtggccaaattcctttccgcttgtctgggaatggtgcatttgaagctctgttcaat
gggtctcctggagtaggtgtgacacggggtaatgtgggtgattattttgttggtcctggc
ttggaagaattgtttgagcagctttcagctaatgataggaggggtcctccccctgcatcg
aggggttctattgatgcaatgccaactatcaagatcacaaacaagcatcttcgttctgat
tcacattgccctgtttgccaagacaaatttgagttgggatctgaagcgaggcaaatgcca
tgtaaacatgtatatcactcagattgtattgtaccatggctagtccagcataattcatgc
cctgtttgccgccaagaactaaatccgcaaggatctgcaagtggtcgtaatgaaaacagt
agaagtagaagcagtggtaataccagtggaagagagactggtagggaaagccaaggaaga
cgaaatccattttcttctctgtggccgtttcgcgcttctagttctagctctagttctaac
cgtaacccaccacatgaaagcagcccaccaacagcgcgtgagaatagaaatgaaatggag
tattcaggatggccctttgactattaa
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