KEGG   Argentina anserina (silverweed cinquefoil): 126782851
Entry
126782851         CDS       T10558                                 
Name
(RefSeq) uncharacterized protein LOC126782851
  KO
K12828  splicing factor 3B subunit 1
Organism
aans  Argentina anserina (silverweed cinquefoil)
Pathway
aans03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aans00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126782851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aans03041]
    126782851
   03036 Chromosome and associated proteins [BR:aans03036]
    126782851
Spliceosome [BR:aans03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126782851
 Complex B
    126782851
 Complex C
   U2 SnRNP specific factors
    126782851
Chromosome and associated proteins [BR:aans03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    126782851
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 126782851
NCBI-ProteinID: XP_050364137
LinkDB
Position
2:13368646..13372810
AA seq 1265 aa
MSDPEIAKTQEERRRMEQQLASLNSLTYDAEFYGGTDKADYVSSIPVNDEDENLDPVDND
VARRMASYTAPKSLLSDMPRGAEEDDASGMPRSKKIIDREDDYRRRRLNRIISPERHDAF
AAGEKTPDPSVRTYAEIMREEALKREKEETLRLIAKKKKEEEESGKAAPLLQAAGKRRNR
WDQSQDGDGGAEETKKAKTTATSDWDLPDATPGRWDAPTPGRVADATPGMARRNRWDETP
TPGRVVDSDATPGGGATPGATPAGMTWDATPKLPGMATPTPKRQRSRWDETPATMGSATP
GSVATPGPGGYTPGVTPAGGIGLETPTPGALNLRGPITPEQYNLFRWEKDIEERNRPLSD
EELDAMFPQEGYKILDPPPKYVPIRTPARKLLTTPTPMMTPQYAIPEENRGQQFDVPKEL
PGGLPFMKPEDYQYFGALLNEDEEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLT
DKARDFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEP
LLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALG
IPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIENGLSDENQK
VRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAL
YASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWV
RRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVVNLG
ASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVRPYLPQICGTIKWR
LNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKA
IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRIC
FELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIV
AETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMD
RDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRV
ALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPMLEDEDHNVYTRPE
LMMFV
NT seq 3798 nt   +upstreamnt  +downstreamnt
atgtcagacccagagatagccaagacgcaggaggagcggcggaggatggagcagcaactg
gcctccctcaactccctcacctacgacgccgagttctacggcggtaccgacaaggccgac
tacgtctcctcgatcccggtgaacgacgaggacgagaatctggatcccgtcgacaacgac
gtcgcccggagaatggcgtcctacacggcgcccaagtcgctgctgagcgacatgcccagg
ggcgccgaggaggacgacgcgtcggggatgccgaggtcgaagaagattatcgaccgcgag
gacgattacaggaggcggaggctgaaccggatcatatcgccggagcgacacgacgcgttt
gcggcgggggagaagacgccggacccgtctgtgaggacgtatgcggagattatgagggag
gaggcactgaagagggagaaggaggagacactgaggcttattgccaagaagaagaaggag
gaagaggagtctgggaaggcggcgccgctgctgcaggccgcggggaagaggaggaatagg
tgggaccagtctcaggatggggatggtggagctgaggagacgaagaaggcgaaaactacg
gcgacgtcggattgggacttgcctgatgccactccagggaggtgggacgcgccgacgcct
gggagagtggctgatgcaactccggggatggcgaggaggaatcgttgggatgagacgcca
actccggggagagttgtggattctgatgctactccaggtggaggggccactcctggtgct
actccagctgggatgacttgggatgcgactccgaagcttccggggatggccacgcccacg
ccgaagagacagaggtctaggtgggatgagacccctgctacgatgggcagtgctaccccg
gggtctgtggcgactcctggtcctggtgggtacacacctggtgtgactcctgctggtgga
attgggcttgagaccccgacgccaggtgccctcaatctgcggggacctattacaccggag
cagtacaatttgtttaggtgggagaaggatattgaggagaggaacaggcctttgagtgat
gaagagctggatgctatgtttccacaggagggttacaagattttggatccaccgccaaag
tatgtgccgattaggaccccggccaggaagttgcttacaaccccaactccgatgatgacc
cctcagtatgctattccggaagagaatcgtgggcagcagtttgatgtgcccaaggagctg
ccgggtggcttgccatttatgaaaccagaggactaccagtactttggtgcattgctgaat
gaagacgaagaggaggagttgtcccctgatgagcagaaggagaggaagattatgaagctt
ttgctgaaggttaagaatggtacaccaccgcagaggaagacggcattgaggcagcttact
gataaagctcgcgactttggtgccggccccttgttcaaccgcattctgcctttgctaatg
cagccgactttggaagatcaagagaggcatcttttggttaaggtaattgatagagtgctt
tataaattggatgaattggtacgcccttatgtgcataagattcttgttgtgattgaacct
ctattgattgatgaagactattatgcacgtgttgaggggagagaaattatctctaatctt
agtaaagctgctgggttggctactatgattgcagccatgcgtccagatattgataacatt
gatgaatatgttagaaacactactgctagagctttcagtgttgttgcctccgctcttggt
attcctgctttgttgccatttctgaaagctgtttgtcagagcaagaaatcatggcaagca
cggcacactggaatcaagatagttcagcagattgcaattttgattgggtgtgctgtcctc
ccccacttgaggtctcttgttgaaattattgaaaatggtctgagtgatgaaaatcagaag
gtcaggactattactgctctatcacttgctgctcttgctgaagctgctgctccttatggt
attgaaagctttgactctgtcttgaaaccattgtggaagggtattaggtctcaccgtggt
aaggttctggctgccttcttgaaggccattggtttcattattcctcttatggatgcttta
tatgctagttactatacaaaagaagtgatggttatattgattagagagttccagtctcct
gatgaggaaatgaagaaaattgtgctcaaggtggtgaaacaatgtgtgagtacagagggt
gtagaggctgactatataaggaatgatattctcccggagttcttcagaaacttctgggtt
agaaggatggctctggataggaggaactataggcaacttgtggaaacaactgtggaaata
gcaaataaagtgggtgttgctgatatagtagggagaattgttgaggatcttaaagatgag
agtgagccatataggcgaatggttatggagacaattgagaaagttgttgtgaacttgggt
gcttcggatattgatgctcggttggaggagcttctcattgacggtatactttatgcattc
caagagcagaccagtgatgatgcaaatgtcatgcttaatgggtttggtgcagttgttaat
tctcttgggcagagagtgagaccttaccttccccagatttgtggtaccattaaatggcgt
ttgaacaacaagagtgcaaaggtcagacagcaagctgcagaccttatttccaggattgct
gttgtcatgaagcagtgccaagaggaacaactgatgggccatctgggtgttgtcttgtac
gagtatttgggagaagagtacccagaagttcttggatcaattctgggtgcgctaaaggca
attgtcaatgttattggtatgacaaagatgactcctccaataaaagatctgcttcccaga
ttaactccaattttgaagaatagacatgaaaaagtccaggagaactgtattgacctggtt
ggtcgtattgctgaccgtggtgctgagtttgttccagctagggagtggatgaggatatgt
tttgagcttcttgagatgctcaaggcccataagaagggtatcaggcgagctacagtgaac
acatttggatacattgcgaaagccattggcccacaagatgtccttgctactctgctgaac
aatctgaaggtacaggagcgtcagaaccgtgtttgcactactgtagctattgcgatagta
gcagaaacatgttctccttttactgtactgccagcgctgatgaacgagtaccgtgttcca
gagcttaatgttcagaatggtgttttgaaatccctttctttcctgtttgagtacattggt
gaaatggggaaagactatatctacgcagtgaccccattgcttgaggacgccttaatggac
agggatctggttcacaggcaaactgcagcttctgctgtcaagcacatggctttgggtgta
gctggcttgggttgtgaggacgctttagttcatttgctcaactatgtgtggccaaacatc
tttgagacatccccacatgttattaatgctgtgatggaagccattgaagggatgagagta
gcactgggcgctgctgtggttcttaactactgtctccagggtctgttccatcctgctagg
aaggttagggaggtgtactggaagatctacaattcgctatacattggagctcaagatgct
cttgtggcagcctatcctatgctggaagatgaggatcataacgtgtatactaggcctgag
ttaatgatgtttgtttga

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