Argentina anserina (silverweed cinquefoil): 126782862
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Entry
126782862 CDS
T10558
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126782862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126782862
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126782862
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126782862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
126782862
NCBI-ProteinID:
XP_050364151
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Position
2:complement(29981370..29982882)
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AA seq
274 aa
AA seq
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MSILPKEDSIQIREVWNDNLEEEFHIIRGIVDKYNYIAMDTEFPGVVLRPVGAFKNISDY
NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTENSFIWQFNFREFNVTEDIFASDSIEL
LRQCGIDFKKNSEQGIDVNRFAELLMSSGVVLNDAVHWVTFHSGYDFGYLLKLLTCRSLP
DTQAGFFDLIKIYFPMVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA
CTFRKLRDTFFSGSTEKYAGVLYGLGVENGQSTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttgccgaaagaggattcgattcaaatccgggaggtgtggaatgataatctt
gaagaggagttccatataatacggggtattgttgacaagtacaactatattgctatggat
accgagttccctggtgtggttcttcgccctgttggggcttttaagaacataagcgattac
aactatcagactttgaaagacaatgttgatatgttgaaattgattcagttgggcctcact
ttctccgacgagaatggcaaccttcctacctgtggtaccgaaaactccttcatctggcag
ttcaatttccgcgagttcaatgtcaccgaagacatctttgccagcgattcaattgagttg
ttgcgtcaatgtgggattgactttaagaagaacagcgagcagggtattgatgtgaaccgg
ttcgctgagctcttgatgtcttcaggggttgtattgaatgatgctgtgcattgggttacc
ttccatagtgggtatgattttggatacctgctcaagcttttgacttgtaggagtttgcct
gacacgcaagctggtttctttgatttgatcaagatatacttcccaatggtgtatgatatc
aagcatttgatgaagttctgcaacagcctccacggtgggttgaacaagcttgcagaactc
ttggatgtggaaagaattggtgtgtgccatcaagcaggctcagacagtttgcttacagca
tgcacctttaggaaattgagggataccttcttcagcggctcgaccgagaaatatgcaggt
gtcctgtacggtctgggtgttgagaatggacagagtactaattga
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