Argentina anserina (silverweed cinquefoil): 126782911
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Entry
126782911 CDS
T10558
Name
(RefSeq) F-box protein SKP2B isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126782911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126782911
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126782911
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
126782911
NCBI-ProteinID:
XP_050364224
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Position
2:complement(14488132..14492641)
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AA seq
369 aa
AA seq
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MVGKENLKTEDLNLCFEKLMMIGGGEVKIDGRVITDWKDIPMELLLQILTLVDDRTVIIA
SGVCRGWRDAICLGLTRLSLSWCNKNLNNLVLSLAPKFTRLQTLILRQDKPQLEDNAVQS
IANFFRDLQVLDLSKSFKLTDRSLYALAHGCPNLTRLNISGCSAFSDIALEYLVGFCPKM
KVLNLCGCSRAASDRALQAIGRNCSELQCLNLGWCEEVGDVGVMSLAYGCPDLRIVDLCG
CVQITDDSVVALANRCPRLRSLGLYYCQNITDKAMYSLAQSLVKNKPAAMWESRKSRSDE
EGLKTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVQAHRT
ATAFAHSAH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggttgggaaagaaaacctcaagaccgaggacttgaacttgtgctttgagaagctgatg
atgatcggcggtggggaagtgaaaattgacgggagggttataactgattggaaggatatt
ccgatggagctcctgctgcagattctgacacttgtggatgatcggacggtgatcatagct
tctggtgtctgtcgcggttggagagatgctatttgcttgggactcactcggctctccctc
tcatggtgtaacaagaacttgaacaacttggtcttatctcttgctccgaagtttacaagg
ttgcaaactctaatactacgtcaggataaacctcaacttgaagataatgctgttcagagc
atagcaaacttctttcgtgatctgcaggtcttggaccttagcaaaagcttcaagctcact
gaccgctccctgtatgccttagctcatggctgtcctaatcttacaagactcaacatcagc
ggttgttctgcattcagtgacattgctcttgaatatctggttggcttttgcccaaaaatg
aaagttctgaacctctgtggatgttccagggctgcatcagatagggcattgcaggctatc
ggccgtaactgcagtgaattgcagtgtctgaatcttggttggtgtgaggaagtcggtgat
gtaggagttatgagtttggcatatggatgccctgacctcagaattgttgacttgtgtggc
tgtgtccaaataacagatgacagtgtggttgctttggcaaacagatgtcctcgtctgaga
tccctcggcctttactattgtcaaaacattacagacaaggcaatgtattctttagcccag
agtctagtgaaaaacaagcctgcagcaatgtgggaatccaggaaaagcaggagtgatgaa
gaagggcttaagactctcaatatcagccagtgcacagcccttaccccttctgctgttcag
gcagtttgtgactcctttccatcacttcatacctgctctgggaggcactccctcatcatg
agtggctgtttgaacttgacatccgtgcattgtgcgtgtgctgttcaggctcaccgcact
gctactgcctttgctcattcagctcattga
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