Argentina anserina (silverweed cinquefoil): 126783297
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Entry
126783297 CDS
T10558
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aans03009
]
126783297
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
126783297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR54
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
VPS8_N
Beta-prop_SCAP
Nucleoporin_N
Ge1_WD40
DUF465
Motif
Other DBs
NCBI-GeneID:
126783297
NCBI-ProteinID:
XP_050364698
LinkDB
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Position
2:26681234..26684854
Genome browser
AA seq
439 aa
AA seq
DB search
MEVVVASSSVDSDIACWDFSSGAELLRYKSCASPNHGLVSVGDRFLASSQTSGSVKYWAW
SKPQPDAKSSQEEPIKPLAANREGTYVVGGGKSGTIYLWEVTSGRMLKKWDAHYRAVSCL
RFSDDGTMLFSGSEDGEIRVWNLVTILDDHQSQRENHQYLLSFTEHSLSVTDMVLGFGYD
PIIASASEDRTCKIWSFSRGTLLRNIVFPTIIDAIAMDPCENLLFAGGRDGNIYVAALNT
ARTGSSKYGLHIINRFSNHSKAVTCLAWGLSGNYLISGSEDGVVRVWDAKTANIVRVLRH
SKGPVNNILVIRQQVSQMNPSSQASSWRHGSSLPPPLEKRAYEADKDAGFKAVIGLNNAC
SKSTDAVLITSDVMERQIRELQQQGSASAEMEIERLKLENKKCIQMVQQWKKMYDNLHQF
CVNELVDGDKGGAPNENAL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtggtggcctcctcctccgtcgactccgacatcgcctgctgggacttcagc
tccggcgccgagcttctccgctacaagtcctgcgcctcccccaatcacgggctcgtttcc
gtcggcgaccgcttcctcgcctcctcccagaccagtggctctgtcaagtactgggcctgg
tccaagcctcagcctgatgcgaaaagctcgcaagaagaaccgatcaagccgcttgcagct
aacagggagggcacttatgtagttggtggaggtaaatctgggactatatatctgtgggag
gttactagcggtaggatgcttaagaagtgggacgcgcactatagagctgtgagctgcttg
agattttctgatgacgggaccatgctgttttcggggtctgaggatggagaaattagagtc
tggaaccttgtaacgatattagatgatcatcagagtcaacgtgaaaaccaccagtacttg
cttagctttactgagcactcgctttctgtgacggatatggtgttgggatttggatatgat
cccattatcgcgtcggcttcagaggatcgaacgtgcaagatttggagcttttcaagagga
acattattaagaaatatagtttttcccacaataattgatgcaattgcaatggatccttgt
gaaaatctcctctttgctggtggtagagatggaaatatttatgtggccgcacttaatact
gcaaggacaggtagcagcaaatatggactgcatatcatcaatcgcttctcaaatcacagt
aaagcagttacttgcttggcttggggactgtccggaaactatttgatctctggatcagag
gatggtgtggttcgagtatgggatgctaaaactgctaacattgttcgtgtgctcagacat
tcaaaaggtccggtgaataatattcttgtcattagacaacaagtttctcagatgaaccca
agttcacaagcctcctcatggaggcacgggtcctcattaccacctccactggaaaagcgt
gcatatgaagcagataaagatgcaggttttaaggcagtcattggtctcaataatgcttgc
agtaaatccacggatgcagtgttgatcacttctgatgtaatggagcgccaaattagagag
cttcagcaacaaggttctgcttcagctgaaatggagattgagagactaaagcttgagaat
aaaaaatgcatacaaatggttcagcagtggaagaaaatgtatgacaatttgcatcagttc
tgtgtgaatgagcttgtcgatggtgataaaggaggagccccaaatgaaaatgctctctaa
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