Argentina anserina (silverweed cinquefoil): 126783621
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Entry
126783621 CDS
T10558
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126783621
Transcription machinery [BR:
aans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
126783621
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
126783621
NCBI-ProteinID:
XP_050365081
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Position
2:27087433..27090751
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AA seq
563 aa
AA seq
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MDIFLVTPRGFNGLYCSSTFVPRKTMGLGFRLNLKCGFHVHNSHWQTNSPSKLSSTSVRG
REGCFSSARLSFLSVISEECEISSKDPLKAYTCPSASAQLVDDDFSEMEEKMNIRRISKS
GSLTMIDDKEHSFMSSAGLRTSHFTLLLQNLNVLEETFADSNVLQLEKEIIMQLGRLGAL
KLFDICLSRTLKTSSFIYLSDIPTEPIEENKIERKNIVRSGKKEERKSRKRPPDSLPLKP
MKEGFKKPIPSSVRKASNSRSRRVMMAKNEAEMSVGVKVIADLERLKATLEKDTGKVPSL
RCWAEAAGVDEKVLQQQLQFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGYMG
LLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINQIQKARKVNY
NSHMKYPDDEAIAKITGLSLAKIRSASRCLRVVGSVDHKIWECSAGTYMEFTPDIAVESP
EESVMRQHMKNDIHDLLEGLNSREKQVLALRYGLNYCNPKSLEEIGRLFHVSKEWIRKIE
KNALTKLRDEETNKNLIHYLKQW
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttttggtgactccccgaggatttaatggactctattgctcctccactttt
gtgccaaggaaaacaatgggtttgggttttaggctgaacctcaagtgtggttttcatgtt
cataattctcactggcaaaccaattctccttccaagctttcttcaacttctgttagaggc
agggaggggtgtttcagttcagcaaggctctcatttctgtctgttatatctgaggaatgt
gagatttcgagtaaggatcctctgaaagcgtacacgtgtccatctgcatccgcgcagctc
gtagatgatgatttctcagaaatggaagagaagatgaacattaggaggatatccaaaagt
ggctcactaaccatgattgatgataaagaacatagctttatgtccagtgcagggttaaga
acatctcattttaccttgttactgcaaaatcttaatgttttggaggagacttttgctgat
tctaacgtgttacagttggaaaaggagatcattatgcaattaggaaggcttggagctctc
aagttatttgatatttgtctatcaagaacacttaaaacgtcgagttttatttatttatct
gacatacctactgaaccgattgaagagaataagattgaaaggaagaatatcgtccgttcc
ggcaaaaaggaagaacggaaatcaaggaaaagaccaccagattcgttgcctttaaagcca
atgaaggaaggttttaaaaagccaattccttcatcagtaagaaaagcatctaattctaga
agtcgaagagtaatgatggctaaaaatgaggcagaaatgtcagtgggagttaaggtgatc
gctgacttggagaggcttaaagcaacattggaaaaggacaccggtaaagtaccgtcttta
agatgctgggcagaagcagctggagttgatgaaaaggtgctgcaacaacaattgcagttt
ggttggtattgccaagatgagcttgtaaggagcactaggtccttagttctataccttgct
cgaaactatagaggacttggagtagccttggatgatttgcttcaggctggatacatgggt
ctcctacagggtgctgaaaggtttgacccctcgcggggttacagattctcaacctatgtc
cagtactggataagaaagtcaatgtcaagattggtggcacaacatgccagaggaattaaa
attcctaacacactaagtaaggcaataaatcagatacagaaggctcgaaaagtgaattac
aacagccacatgaaatacccagatgatgaagcaattgcaaagattacaggtctttccttg
gcaaaaatcagatcggctagcagatgtctgagagttgtgggttcggtagatcataagata
tgggaatgctcagctggaacatatatggaatttactccggatatagcagtagagagtcct
gaagaatctgtcatgcggcaacacatgaaaaacgatattcatgatctgctggaaggcttg
aattcaagagagaagcaagttttggccctgcgatatggtctgaactactgcaaccccaag
tcacttgaggagattggaaggctttttcatgtgagcaaggaatggatacgaaagatagaa
aagaatgctctgactaagctaagggatgaagaaaccaacaaaaacttgatccattatttg
aagcagtggtaa
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