Argentina anserina (silverweed cinquefoil): 126783713
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Entry
126783713 CDS
T10558
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126783713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126783713
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
126783713
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
126783713
NCBI-ProteinID:
XP_050365189
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Position
1:complement(3663679..3665461)
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AA seq
222 aa
AA seq
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MGEEAGVSVCVSDSNGVDHNQNDDQSRQLDIYPLSCYYFGSKEAIPLKDETLADRVQRLN
SNYATYGLRTCVEAVILVELFKHPHILLLQVRNCCFKLPGGRLRPGESEVDGLKRKLSRK
LCVNTNADGIAWEVGECLGVMWSPDFETSPCMDLPSSVRNPKECTKLYLVKLPESRKFIV
PKNLKLLAIPLCQINKNRETYGPIISGVPEMLAKFTLNIKEA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagaagcaggggtttctgtatgcgtgtcagacagtaacggtgttgatcataat
cagaacgacgatcaaagccgtcaactggacatataccctctcagttgctactactttgga
tccaaggaagccattccgctcaaggatgagactttagctgatcgtgttcagagattgaac
tccaactatgctacttatggattgaggacttgtgtagaagcagttattttggtcgagttg
ttcaaacatcctcatatactgctcttgcaagtaaggaattgttgttttaagcttcctgga
ggtcgcttaagacctggggaatcagaggttgatggtttgaagcgaaaactgtcaaggaag
ctttgtgtcaatactaatgctgatgggattgcttgggaggtgggtgaatgccttggtgta
atgtggagtccagactttgaaacatcgccatgtatggacttgccgtcttcagtgagaaac
ccaaaggagtgcacaaaactctatcttgtaaagttgccggaaagtcggaagttcattgtt
ccgaaaaacctaaaattgctggctattccattgtgccagatcaacaaaaatcgcgagacg
tatggacctattatatctggtgttcctgagatgctagcgaagttcaccttaaacattaaa
gaagcatga
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