Argentina anserina (silverweed cinquefoil): 126784663
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Entry
126784663 CDS
T10558
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03022
Basal transcription factors
aans03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126784663
09124 Replication and repair
03420 Nucleotide excision repair
126784663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126784663
03400 DNA repair and recombination proteins [BR:
aans03400
]
126784663
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126784663
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126784663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
126784663
NCBI-ProteinID:
XP_050366098
LinkDB
All DBs
Position
2:complement(22593801..22598131)
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AA seq
296 aa
AA seq
DB search
MASVPSKLYADDVSLLMVLLDTNPFFWSSSSLPFSKFLSHVLTFLNSILLLNQLNQVVVI
ATGYSSCSYIYDSDSAPSQGSDQGRMPALCSNLLQNLEEFVAKDEQLLKEGSAEGIPSSL
LSGSLSMALCYIQRVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPIDSC
YMGSSNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSSGVDFRA
SCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEASSKANKKRKASDT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggttccttcaaagctctatgccgatgacgtcagccttctgatggtcttatta
gacaccaaccccttcttctggagctcatcgtctctcccattctccaagttcctctcccat
gtgcttacatttttaaactcgattttactgcttaatcagctcaaccaagtggtggtcatt
gctaccgggtacagttcatgtagctacatctacgattcggattcggcgccgagccagggc
tctgatcaggggagaatgccggctctttgctccaacttgctgcagaatctggaggagttt
gtggccaaagatgagcagttactgaaggaaggctcggccgaagggattccttcatcgttg
ttatcggggtcgttgtcaatggctttgtgctatatacagagagtttttcgatcaggacca
cagcatcctcatcccaggattttatgcttacagggatcgtcagatggtcctgagcaatat
gttgcaatcatgaatgcaatattttctgcacagcgatctatggttcctatagactcttgc
tatatgggctctagtaactctgccttcctacagcaggcttcatacattactggtggtgta
tatctgaagccccaacagccagatggactgcttcagtaccttacgacagtttttgccact
gatttgcattcccgagcatttttacagcttccgaaatcttctggagtggattttcgtgct
tcgtgcttttgccataaaaaaactatagacactgggtacatctgttctgtgtgcttgtcc
atattctgcaagcatcacaagaaatgttcaacttgtgggtcagtatttggtcaagctcag
tcagaagcttcctcaaaagccaacaaaaaaagaaaggcttcagacacctga
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