Argentina anserina (silverweed cinquefoil): 126784749
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Entry
126784749 CDS
T10558
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126784749
09123 Folding, sorting and degradation
03018 RNA degradation
126784749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126784749
03041 Spliceosome [BR:
aans03041
]
126784749
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126784749
mRNA degradation factors
5'-3' decay
Lsm complex
126784749
Spliceosome [BR:
aans03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126784749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
126784749
NCBI-ProteinID:
XP_050366204
LinkDB
All DBs
Position
2:21773502..21775541
Genome browser
AA seq
148 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKRTDRKPPGVGRGRGRGGREDAPGGRQPKGIGRGLDD
GSKGIGGGRGRGGPGGKAGGRGGGRGRA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgctatctctgctcaagacagcccaagggcaccccatgttggtggagctcaag
aatggggagacctacaatggccatttggtgaattgtgacacttggatgaacattcatctt
cgagaagtcatctgcacttccaaagacggagacaggttttggaggatgcccgagtgttat
atccgtgggaacactatcaaatatctgagagttcctgatgaggtgattgacaaggttcag
gaagaaaccaagagaacagataggaaaccacctggagtaggacgtggaagaggaagagga
ggtagggaggatgctcctggcggacgacagccaaaaggcattggacgtggcttagatgat
ggttctaagggtattggtggaggtcgtggcagaggcggaccaggtggaaaggctggtgga
agaggtggaggccgaggccgagcttga
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