Argentina anserina (silverweed cinquefoil): 126785028
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Entry
126785028 CDS
T10558
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
126785028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aans03036
]
126785028
03400 DNA repair and recombination proteins [BR:
aans03400
]
126785028
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
126785028
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
126785028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
HDA2-3
ResIII
WHD_SOWAH
Motif
Other DBs
NCBI-GeneID:
126785028
NCBI-ProteinID:
XP_050366560
LinkDB
All DBs
Position
2:18803630..18809490
Genome browser
AA seq
1217 aa
AA seq
DB search
MEEDEDRILLSSLGVTSANPEDIERDILCEAKNNGNAGDVGKVGGSNEVEDEEEEGGKGD
SVDASGASHAKLYSKLRAVEFEINAVASTVEDEQGGDGDGGEERGDKEDSVEASDSLQHA
LATDRLRSLKKTKAQLEKEISDLGKERPAKEIELDRVLSNIVKEKAAPKRKSKQVQKSGK
KQGKRVKTVSFDDDDDFDAVLDAASTGFVETERDELVRKGILTPFHKLKGFERRLQDAGP
SQRHSDPAEEDRNDDLFSARVARAAQSISKAAQARPTTKLLDSESLPRLEAPTFSFQRLR
KPLKIPQSIENDTQKNKTSGMKRKRPLPEKRWRKRISREEMDLNGNELSTQSCEEGNQED
TGDVDDDEYPHVTLEGGLKIPEYIFEQLFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKT
IQVLSFLGALHFSRMYKPSIIICPVTLLRQWRREAKKWYPSFHVELLHDSAQESTNRKKQ
YKSSGSDSDSEGSLDSDYEKPVSSKGAKKWDALINRVLRSESGLLITTYEQLRIVGEKLL
DIDWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGK
LGVLPIFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPK
KTEHVIFCSLTTEQRSAYRAFLASSDVEQILDGNRNSLYGIDVMRKICNHPDLLEREHAG
QDPDYGNPERSGKMKVIAQVLKAWKEQGHRVLLFTQTQQMLDIIESFLIASEYSYRRMDG
LTAIKHRMALIDEFNNSDDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER
AWRIGQKRDVTIYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFIL
NDEGDSGATETANIFGQISEDANVVSAQKDDHSKREFKKGCVPHADAYTGKGKNSEIETS
RTNGKEKADHSEGDADEETNILKSLFDTQGIHSAMNHDVIMNAHDEEKMRLEEQASQVAQ
RAAEALGQSRMLRSRDSVSVPTWTGKSGMAGAPSAVRGKFGSTVNSRLISNAKPSTEVSN
NKTNGFMAGASAGKALSSAELLARIRGNQEKAVEAGIDHQLGTASSSSFRARADGAGPSR
QSQNLGGVQPEVLIRMICTFLQERGGSTNSATIVQHFKDRIPSKDLPLFKNLLKEIAKLE
KTPSGSVWVLKPEFNQQ
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaggacaggatcctgctgagcagtttgggcgtgacgtcagccaatcct
gaagatattgagagggacattttatgtgaggcaaagaacaatggcaatgccggcgatgtc
ggcaaggttggagggagcaatgaggtggaggatgaggaagaggagggtgggaaaggggac
agcgttgacgcatctggggccagccatgccaagttgtatagtaaattaagggctgttgag
tttgaaatcaacgcggtggcatccactgttgaggatgaacaaggcggtgatggtgatggg
ggcgaggaacggggggataaggaggatagtgtggaggcttccgatagcctgcagcatgct
ttggccactgatagattaaggagtctgaagaaaacaaaggcgcagcttgagaaggagatt
tctgacttgggaaaggaaagaccggctaaggagattgagcttgatagagtcttgtcgaat
attgtcaaggagaaggctgctcccaagaggaagtcgaaacaagttcagaagtctgggaag
aagcaagggaagcgggttaaaacggtctcgtttgatgatgatgacgactttgatgctgtg
ttggatgcagcctccacaggatttgttgaaacggaaagagatgaattagttcggaaaggg
atcttaactcctttccataaattaaaaggctttgaacgacgtcttcaagatgctggacca
tcccagaggcatagtgatccggcagaggaagacagaaatgatgatttgttttcagccagg
gttgctagagcagcccagtcaatatcgaaggctgcacaagcccgcccaactacaaagctg
cttgattcggaatctctaccaaggcttgaggcaccaactttttccttccagaggctaagg
aaacctctaaaaatccctcaatccattgaaaatgatacacagaagaacaaaacatcagga
atgaaaaggaagcgtcctttgcctgagaagcgatggagaaagcgcatttctcgtgaggaa
atggatttgaacggaaatgagttgagtacccagagctgcgaagaaggaaaccaggaagat
actggagatgtagatgatgatgagtatcctcatgttacccttgaagggggattgaaaatc
cctgagtacatttttgaacaactttttgactatcaaaaggtaggggtccaatggctctgg
gaattgcattgccaaaaagcaggtggaatcattggagatgagatgggtcttggtaaaacc
atccaggtcttatctttccttggtgcactgcatttcagtcggatgtacaaaccaagcatc
attatatgcccggttacacttttgcgacaatggagaagggaagctaagaaatggtaccca
agttttcatgtggagttacttcatgattctgctcaggaatcgactaatagaaaaaagcaa
tacaaatcttctggaagtgattctgatagtgaaggttcactggatagtgattatgagaaa
ccagtatcatccaaaggtgccaaaaaatgggatgccttaataaatcgtgttttgaggtca
gaatctgggttgcttattacaacatatgagcaactccgtattgtaggggaaaaattgcta
gacattgactggggttatgcagttttagatgaaggacaccgtattcggaacccaaacgca
gaaattacgctagtttgtaaacagttacaaacagtacaccgtattatcatgacgggtgcc
ccaattcagaacaagctgactgaactgtggtccttgtttgattttgttttccctggaaag
ttgggggttttgcccatatttgaggctgagtttgctgttcccatatctgttggcggttat
gcaaatgcttcaccgttacaagtatccacagcatacaggtgtgcggtggttctgcgagat
ctgattatgccatatctcctccggcggatgaaggctgatgtgaatgcacagcttcctaaa
aaaactgaacatgtcatattctgcagcctcaccactgagcaacgatctgcgtatagagct
tttcttgccagctctgatgtggaacagattttggacggtaataggaattcactttatgga
attgatgtgatgcgtaaaatttgcaatcaccctgatctgcttgagagggaacatgctggc
caggatcctgattatgggaatcctgagcgcagtgggaaaatgaaagttattgctcaagtt
cttaaagcgtggaaggagcaaggtcatcgtgttcttctatttacgcaaactcaacagatg
cttgatatcattgaaagttttctgatcgctagcgagtatagctatcggagaatggatggt
cttactgctatcaaacatagaatggccttaatagatgagtttaacaactctgatgatgtg
tttattttcatccttacgactaaagtaggagggctagggacaaatttgacaggcgcaaat
agggtgatcatctttgaccctgactggaacccttcaactgacatgcaggccagggagcgt
gcttggcgtattggtcagaagcgggatgtgactatatatagattgattactcgtggaact
atagaagagaaggtgtatcatagacagatttacaaacattttttgacgaataagatactg
aaaaaccctcagcagagaaggttttttaaagcgcgagatatgaaggacctcttcattttg
aatgatgagggagatagtggggctactgaaacagctaatatatttgggcagatatctgaa
gatgccaatgttgtttccgctcagaaagatgaccacagtaaacgagaattcaagaaaggg
tgtgttccacatgccgatgcatatactgggaagggaaagaactctgagattgaaacatca
aggacaaatggaaaagaaaaggctgaccacagtgagggtgatgctgatgaagaaacaaat
attttgaaaagtctttttgacacgcaagggatccatagtgctatgaaccatgatgtgatc
atgaacgcccatgatgaagagaagatgaggcttgaggagcaagcttcccaagttgcacaa
agagcagcagaagcattgggccagtcgcgaatgcttcgaagccgcgacagtgtatctgtc
cccacatggactggcaaatcaggaatggcaggtgcaccatcagctgtccgggggaaattt
ggttctactgtgaattcccgattgataagtaatgccaaaccctcaactgaagtttccaac
aataaaacaaatgggttcatggctggtgcatctgctggaaaggcactatcttctgctgaa
ttacttgcaagaattcgaggaaatcaagaaaaagctgttgaagctggaattgatcatcag
ttggggacggcttctagttcttctttcagagcaagagccgatggtgctggcccttctagg
cagtcgcagaacttaggtggagtacagcccgaagtactgattcgtatgatctgtacattc
ctccaagaaagaggtggaagtacgaattctgccacaattgttcagcatttcaaggacaga
ataccctcaaaagatctgcccttgttcaagaatcttttgaaggaaatagcaaagctagag
aaaaccccgagcggatcagtttgggttttaaaaccagagtttaatcaacagtaa
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