Argentina anserina (silverweed cinquefoil): 126785396
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Entry
126785396 CDS
T10558
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126785396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126785396
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126785396
U7-dependent histone pre-mRNA processing factors
126785396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
126785396
NCBI-ProteinID:
XP_050367032
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All DBs
Position
2:complement(11742716..11749384)
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AA seq
541 aa
AA seq
DB search
MASSSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEE
TALSARRNLQGYEINGRQLRVDFAENDKGTDRNREQGRGGPGVTASVDPQKQVGGPAVHG
DSLHNQPIGLHIAITAAAVMAGALGDPQAVLQSNQNSLQNQSALANDPLTLHLAKMSRSQ
LTQIISEVKGMAIQNKELAHKLFLARPQLPKALFQAQIMLGMVTPQMLQNVRQASGQSSQ
PLFSYGQQIPLPAIPNIADLAPPENRLQSGLMPKMQDGSFSAGPQNLLVHSQFSLPRQQN
MQPRMQLPQHANHNVMQHATLLGQAGISALPPIHPQSSSSLSIRPQAQVAKPSISSQKMQ
PSLLQHPGQVGPSHLGHNAQMVHQNATLQHSPFSRPLSDAIYQPGTSLSVGVLESINKDA
DRPSRVVAGSSESVSRPSKLMKLDDGRSTPLLAGGIIVSSANESALPNAFGAGLLPGKSV
HRSEGVHSEKQISEPQIPPEVDSALLQQVLSLPPEKLNLLPPEQREEVIKLQQRFRQMQQ
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcttctcagcaccgctgcgttttcgttgggaatattccttatgatgccacc
gaggaacagctcatagaaatctgccaggaggttggccctgttgtatcctttaggttagtt
attgatagagagactgggaaaccaaaaggttatggattttgtgagtataaggatgaagag
acagcattaagtgctcggcgtaatcttcaggggtacgagatcaatggccggcaattacga
gttgattttgctgaaaatgacaagggcacggacagaaatcgtgaacagggtcgtggtggg
cctggagtgactgcaagtgttgatcctcaaaagcaagttggaggcccagcggttcatggt
gattctcttcataatcagccaattggtctccatatagcaataacagctgcagccgttatg
gcaggtgctctaggtgatcctcaggctgttctgcagtcaaatcaaaatagtttgcagaat
cagtctgcattagccaatgatcctttgacactccatctagctaaaatgtctaggagtcaa
ttgactcaaatcatctcggaggtcaagggaatggctatacaaaacaaggaactagctcat
aagttatttctagcgaggccacagttgccaaaagctctatttcaggcacaaataatgctt
ggaatggtgaccccacaaatgttgcagaatgtcaggcaagcttctggccagtcctcacaa
cctctattcagttatggccaacagattccattacctgctattccaaatattgctgattta
gcccctcctgaaaataggttgcagtctgggttgatgcccaaaatgcaagatggctctttt
tcagctgggcctcagaatttattggttcatagccagttttctttaccccgacaacaaaac
atgcagccccgcatgcagcttccacaacatgcaaaccacaatgttatgcaacacgccaca
ctgctagggcaggctggaatttcagcacttcctcctattcacccgcagtcctcaagcagt
ttgtccattcgaccacaagctcaggttgccaaaccttccatatcaagccagaaaatgcaa
ccttcgttgttacaacaccctggtcaggtcgggccttcacatttgggccataatgctcag
atggttcatcaaaatgctactctacagcactctcctttttcccgtcctttgtctgatgcc
atatatcagcctggtacctcattatctgtgggtgtcttagagtcgattaacaaagatgct
gatagaccttctcgagtggtcgctggttcttcagaatcagtttctcgcccttcaaaacta
atgaagttagacgatggacggagcactcctttgttagcagggggtatcattgtttcaagt
gccaatgaatctgcattgcccaatgcttttggagcaggattgttgcctggaaagtctgtt
cacagatcagaaggtgtccactctgagaaacaaatttctgagcctcagattccacctgag
gtagactctgctttgttgcaacaagttctgagcctaccacctgaaaaattgaacttgttg
ccaccggaacagcgagaagaagtcattaagctgcagcagaggtttcggcagatgcagcaa
tcttag
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