Argentina anserina (silverweed cinquefoil): 126786255
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Entry
126786255 CDS
T10558
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126786255
04121 Ubiquitin system [BR:
aans04121
]
126786255
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126786255
Membrane trafficking [BR:
aans04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
126786255
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126786255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
Zf_IFT144_1st
zf-C3HC4_3
zf-RING_UBOX
zf-RING_10
zf-HC5HC2H
Zn_ribbon_HMPTM
Zn_ribbon_IFT122
Motif
Other DBs
NCBI-GeneID:
126786255
NCBI-ProteinID:
XP_050367982
LinkDB
All DBs
Position
3:complement(35002394..35004683)
Genome browser
AA seq
395 aa
AA seq
DB search
MEETMAARYWCYRCSQMVNPVMGADMKCPLCQCGFIEEIDGTTRDSHEADSEFGSDRPLS
LWAPILMGMMNNPRRSRRRRLRRLDFDEDEDDDNDNDNDDALGGDTELDRELESIIRRRR
RSSSTILQLLRGIRAAGLASESDNSESDRDRERERERERERLILINPFNQTIILHGSYDS
SQGQNNNHTPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKENL
QCSVCLDDLEIGVEAKEMPCKHKFHGKCILPWLELHSSCPVCRFQLPADEVKHDDDNSRN
SSNQRGNENIGGEEEEGEGEGEGEGEGEGEGEGDGDGDRIGNGRNGSGRRFQMPWPFNLF
SSTESQSSGSGGNSSLSANATGSGSRSASSQTDDH
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcagctaggtattggtgctacaggtgttctcaaatggtgaacccc
gtcatgggagcagatatgaaatgccctttgtgtcaatgcggattcattgaggaaattgat
ggcaccacaagggacagtcatgaagctgattctgaattcggatctgatcgtcctctctcc
ctctgggctccaatcttgatggggatgatgaacaatccccgccgcagtagacgacgcaga
ttgaggcgactagactttgatgaggatgaggatgatgataatgacaatgacaatgatgat
gcccttggcggagacactgaactcgacagagaacttgaatctatcatccgaaggagaagg
agaagctcatccaccattcttcaactgcttcgaggcattcgagcagctggcttggcatct
gaatcagataattctgagagtgatagggacagagagagggaaagggaaagggaaagggaa
cgcctgattcttatcaatcctttcaatcaaaccatcatccttcatggttcttatgattca
agtcagggtcaaaacaacaatcacactcctataggttccttgggtgattatttcattggg
cctggtctggacttattgctgcaacatttggcagagaatgatcctaatagatatggaact
ccgccggcacaaaaggaggcagtggaagctctccccactgtgacaattaaggagaatttg
cagtgttctgtgtgcttggatgatttggagattggggttgaggcaaaagaaatgccatgc
aaacataaatttcatgggaagtgtattctgccatggctggagcttcatagttcctgccca
gtttgcaggtttcagttgcctgctgacgaagtcaaacacgatgacgataattctaggaac
agcagtaaccagaggggtaatgagaacatcgggggtgaagaggaagagggagagggagag
ggagagggagagggagagggagagggagagggagagggagatggggatggggatagaatc
gggaatgggagaaacggaagtggcagaaggtttcaaatgccttggcctttcaatctgttt
tcgtccacagaatctcaatctagtggcagcgggggtaattcttccttatcggcaaatgca
actggaagtgggagcaggagtgcttcatctcagactgatgaccattaa
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