Argentina anserina (silverweed cinquefoil): 126786673
Help
Entry
126786673 CDS
T10558
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126786673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126786673
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126786673
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
U-box type E3
126786673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
zf-RING_UBOX
Adaptin_N
zf-C3HC4_4
HEAT_EZ
zf-Nse
Neurochondrin
Arm_2
zf-C3HC4_2
zf-C3HC4
RPW8
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
126786673
NCBI-ProteinID:
XP_050368527
LinkDB
All DBs
Position
3:complement(28746311..28751307)
Genome browser
AA seq
679 aa
AA seq
DB search
MEEDRGALVQSLIDTVNEIASISDYRCTVKKQYCNLARRLKLLTPMFEEIRDMKEAVVPV
ETVKALLSFRAALESAKELLRFGSETSKIYLVLEREQTMNKFLEVTARLEQTLSGISYEE
LDISDEVKEQVELVLAQFRRAKGRVDIPDVELYEDLSYLYNKNDAATDPAVFKRLVEKLQ
LAGIGELTQESLALHEMVASSGGDPGASIEKMSMLLKKIKDFVQTENPNMTAPPTEKNVI
ATSSGQSSADNNRKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCP
KTQQTLSNTSLTPNYVLRSLIAQWCEANGIEVPKRASRPNKTTSTCSPAERTKIENLLHK
LTSANPEVQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALLN
LSICEDNKGSIISCGAVPGIVHVLKHGGMEARENAAATLFSLSVVDENKVRIGASGAIPP
LVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVSTLMELLTETGGGMVDEALAI
LAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVMVHLCSGDPQHLVDAQELG
VMSSLLDLQQNGTDRGKRKATQLLERMNRFIEQQAQAEAEVETETEVEVEAVIEPRPLAQ
SETQQPLPLPLPAVNASDS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacagaggcgctctggtgcagagcctgattgacacagtcaacgaaatagcg
tcgatctccgactacagatgcacggtgaagaagcagtactgtaatctggcgaggaggctg
aaactgttgactccaatgttcgaggagattcgggatatgaaggaggcggtggtgccggtg
gagactgtcaaggctttgctttcgttcagagcagcgctggaatcggccaaggagctgctc
agattcggcagcgaaaccagtaaaatttacctggttctggaaagagagcaaactatgaat
aagttccttgaggtgacagctcgtttagaacaaactttaagtggtatttcctatgaagag
cttgatatatcagatgaagtaaaggaacaggttgagcttgttcttgctcaatttagaagg
gccaaaggaagagttgatatacccgatgttgagctatatgaggatctctcatacctttac
aataaaaatgatgcagcaacagatccagcagtctttaagcgattggttgaaaagttacaa
ttggctgggattggtgaacttacacaagagtcgctagcattgcacgagatggttgcttca
agtggtggggatcctggagctagcattgagaaaatgtcaatgcttttgaaaaagataaag
gatttcgtacaaacagaaaatcccaacatgactgctcctcctacagaaaagaatgtcatt
gcaacttccagcggacaatcttctgctgataataatcgcaaggccccagttatacctgat
gatttccgatgtccaatatcattggaattgatgaaggatccagtcattgtttcaacgggg
cagacttatgaacgttcctgtattgaaaagtggctggaacaagggcatggtacatgtccg
aaaacacagcagactctctcgaacaccagtctcacaccaaactatgttttacgtagcctc
atagcccagtggtgtgaagcaaatggtattgaagtgccaaaaagggccagtcgacccaat
aaaactacatccacctgctcgcccgcggaacgtactaagattgaaaatcttcttcacaaa
ctaacatcagcaaaccccgaagtccaaaggtctgctgctggtgaaatccgccttcttgcc
aagcgtaatgcagataatcgtgtggctattgctgaagctggtgcaatccccctccttgta
gggctgctttcaactcctgattcccgcacccaagagcatgctgtgacagcgcttctcaac
ctttcaatatgtgaggataacaaaggaagcatcatttcttgtggagcagttcccggtatt
gttcatgtgctcaagcacgggggcatggaagcacgggaaaatgcagcggcaacactattc
agcctttctgttgtggatgaaaacaaggttagaattggtgcttctggagccattccgcca
cttgttacactgctgagtgaaggcactcaaagggggaaaaaagatgcagcaaccgcacta
tttaacttgtgcatttatcaggggaacaaggggaaagcagtaagggctggtgtagtttca
acattgatggagctgctgacagaaactggagggggaatggtggatgaagcactggccatt
ctagcaatactgtctagccaccctgaagggaaagccgccattggagctgccgaggcagtg
ccagttttggttgaagtgattgggaatggatctcctcgaaacagagaaaatgcagctgcg
gtaatggtgcatctttgttctggagacccacaacatttagtggatgctcaggagctagga
gttatgagttcattattggatttgcaacagaatggcacagacagaggcaagagaaaggct
acacagttgcttgagagaatgaatcggtttatcgagcagcaagctcaagctgaagctgag
gttgaaactgagaccgaggttgaggttgaggctgtgattgaacctcggccattggcacaa
tctgagacccagcagccactgccactgccactgcctgctgtcaacgccagtgacagctga
DBGET
integrated database retrieval system
