Argentina anserina (silverweed cinquefoil): 126787240
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Entry
126787240 CDS
T10558
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126787240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126787240
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
126787240
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
126787240
NCBI-ProteinID:
XP_050369112
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All DBs
Position
3:458257..463374
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AA seq
550 aa
AA seq
DB search
MSSDLLLKPSCGGCGSTSDLYGSNCKHMTLCSACGKTMAENKAKCYDCGAVVTRLIREYN
VRASTASEKNYFIGRFVTGLPNFSKKKSAENKWTLRKDLSDPRRSKDKDGQDQKKYKDVR
PPTDASRERHKNKPWVLEDDSGQSQYNGQLEGAQSAIYYLLMLQGKEFSAIPAGSWFNFN
KVAQYKQLTLEEAEEKMNNRKKTQDGYERWMMKSGTNGPGPLGEKEPGVASVKGRNKMTG
DDDEGNFSDKGEEDEEEETARKNRLGLNKKGGDDEEDEGGNDDDDLDDDSSEKGDDWEHE
EIFTDDDEAVGINPEEREEFEPEVPAPPEIKQDDDDDDANEEEGGLSKSGKELKKLLGRS
AGLNESDADDDDDDDDDMDDDIALPPVVAPKQKDAPKPEPVDNSPVKPGTSGSAAKANPS
ASKSAKGKRKSNGDDAKASNSAPAKKVKTENEQKSVKEEPASESSVPAKGTTASSKTSST
PSGGPTGPVTEEEIRAVLMQKSPITTRDLVNNFPGRLKTKEEKDAFAAILRKMSRIQKNN
GISYVVLREK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacttgctgctgaagccgtcgtgcggcggctgcggatccacctccgatttg
tatgggagcaactgtaagcacatgaccctgtgcagcgcttgcggcaaaaccatggccgag
aacaaagccaaatgctacgactgcggcgccgtcgtcactcgcttgattcgagagtataat
gttagggcaagcactgccagtgagaagaactacttcattggtaggtttgtgacagggctg
cccaatttttcgaagaagaagagtgctgaaaacaaatggactcttaggaaggatctttcg
gatccgagaaggagtaaggataaggatggtcaggaccagaagaaatataaggatgttcgg
ccgcctactgatgcctctcgggagaggcataaaaacaaaccatgggtcttggaggatgat
tcaggccagtctcagtacaatggtcaacttgaaggtgcgcagtcagcaatctactaccta
ttaatgttgcaagggaaggagttttctgctatccccgctggttcttggttcaactttaac
aaggttgcacaatataaacaacttactctagaagaagcagaggagaagatgaacaatagg
aaaaagactcaagatggatatgaaagatggatgatgaaatctggaactaatggaccgggt
ccacttggtgagaaggaacccggtgtggctagtgtaaagggacggaataaaatgactggt
gatgatgatgagggaaatttctctgataaaggggaggaggatgaggaagaagagacagca
aggaaaaataggcttggtctcaacaaaaaaggcggtgatgatgaggaagatgaaggtgga
aatgatgatgatgacctagatgatgatagcagtgagaagggtgatgattgggagcacgaa
gagatattcactgatgatgacgaagctgttggtatcaatcctgaggagagagaagaattc
gaacctgaagtaccagctcctccagaaattaagcaggatgacgatgatgatgacgctaat
gaagaggagggtgggctgagcaaatcaggaaaagagttgaaaaagctacttgggcgaagt
gctggcctgaatgagtcagatgctgatgatgacgacgatgacgacgatgatatggatgat
gatattgccttgcccccagtggtggctccaaagcagaaggatgcacccaaaccggaacca
gttgacaacagtcctgttaaaccagggacttctggatctgctgctaaagcaaacccatct
gcttccaagtcggccaagggaaagagaaagtcgaatggtgatgatgctaaagcatccaac
agtgcacctgccaagaaggtgaagactgaaaatgagcaaaaatcagtcaaagaggagcct
gcctctgaaagtagtgtgcctgcaaaaggtactactgcatcctcgaaaacaagttcgaca
ccatctggtggtcctacaggtcccgtaactgaggaagaaattagggcagttttgatgcaa
aagtcgcccatcaccacacgcgatcttgttaataactttcctggacgactcaaaacaaaa
gaggagaaggatgcttttgcagcaatcctgaggaaaatgtctaggatacagaagaacaac
ggaatcagctatgttgttttgagggagaagtaa
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