Argentina anserina (silverweed cinquefoil): 126787396
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Entry
126787396 CDS
T10558
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126787396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126787396
03036 Chromosome and associated proteins [BR:
aans03036
]
126787396
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126787396
Coactivators
SAGA/TFTC/STAGA complex
126787396
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126787396
STAGA complex
126787396
TFTC complex
126787396
SAGA complex
126787396
SLIK complex
126787396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
126787396
NCBI-ProteinID:
XP_050369247
LinkDB
All DBs
Position
3:15529687..15534528
Genome browser
AA seq
539 aa
AA seq
DB search
MSNVPKEAIEVIAQSIGITNLSPDVALALTPDVEYRVREIMQEAIKCMRHSRRTILTTDD
VDSALKLRNVEPIYGFASGDPLRFKRAAGHRDLFYIDDKDVEFKDVIEAPVPKAPFDVSV
ASHWLAIEGVQPAVPENAPVEALAVYSDIKKSEYKEDGLPVDVKWPVKHVLSRELQLYFE
KITGLTQRSSSNLFQQALVSLATDSGLQPLVPYFTCFVADEVTRNLNNFLYLFALMRLVR
SLLQNPHIHVELYLHQLMPSVITCLVAKRLGNRYTDNHWELRNFTANLVSSICKRFGHVY
HNLQPRMTRTFLHAFLDPNKALPQHYGAIQGLAALGPNVVRLLILPNLDSYMQLLEPEMI
LEKQKNEIKRREAWCVYGALLRAAGQCMHDRFKMFHSLLSPPAHPVWKSNGKIATTNTNK
RKASTNNLMLQPPLKKLAHDGMVGALPKNSMQVDMQGVAGGFSSSVGSLNVGVSSMSHQL
PKEQMSGRDGSSQMVKGPTGLAQVWKEETDVGNVVASLFEHFGESLFPFTPKPELFFFL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtccctaaagaagcaattgaggtcatagcacagagcattggcatcaccaat
ttgtctcctgatgttgcacttgctctcacccctgatgttgagtaccgcgttcgcgagatc
atgcaggaggccatcaaatgtatgaggcactcgcgacggactattcttactacagatgat
gtggatagcgcacttaaattgagaaatgtggagccgatatatggctttgcttctggagat
cctttgaggttcaagagagctgctggacatagggatttgttctacattgatgacaaagat
gttgaatttaaagatgtgattgaggcacccgtgccaaaagcaccatttgatgtatcagtt
gcttctcactggctggcaatcgaaggtgttcaacctgcagttccagaaaatgctccagtt
gaagcacttgctgtttactctgatatcaaaaaatctgaatacaaggaagatggacttcct
gtagatgttaaatggcccgttaagcatgtactatcaagggaactccagctttactttgag
aagattacagggcttactcaaaggtccagctcaaacctgtttcaacaagcattagtgagc
ttggcaacagattccgggctccagccattggtcccttactttacatgtttcgttgctgat
gaggttacgcggaatttgaataattttctctacctattcgctttgatgcgtcttgtgcgg
agccttcttcaaaatcctcacatacatgttgagctttatctccaccaattgatgccatct
gttattacctgccttgttgcaaaaagactaggtaatagatatactgacaatcactgggaa
cttagaaactttactgccaacctggtttcctcaatttgcaaaagatttggacatgtttat
cataatcttcagccacgtatgacaaggacttttcttcatgctttcttggacccaaacaaa
gcattaccccaacattatggtgcaattcaagggctagcagctcttggtccgaatgtggtt
cgcttacttatactgccaaacctggattcatatatgcaacttcttgagccagaaatgata
cttgagaagcaaaagaatgagataaagagacgtgaagcttggtgtgtctatggggccttg
ctgcgtgcggctggccaatgcatgcatgaccgattcaagatgttccacagtttgctctct
cctccagctcatcctgtttggaagagcaatggaaagattgcaacaacaaatacaaataaa
cgcaaagcaagcaccaacaacttgatgctgcaaccaccactaaaaaaattagctcatgat
ggcatggttggagcattaccgaagaactccatgcaagttgacatgcaaggtgttgcaggt
ggattttcatcatctgttgggagcttgaatgttggtgtatcatcgatgtcccaccagttg
ccaaaggaacaaatgtcaggaagggatggcagtagccaaatggtaaaggggcctactggt
cttgctcaggtatggaaagaagagactgatgttgggaatgtagttgcatcattgtttgaa
cattttggtgaaagtctattcccctttactcccaaaccggagttattttttttcttgtga
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