KEGG   Argentina anserina (silverweed cinquefoil): 126788182
Entry
126788182         CDS       T10558                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aans  Argentina anserina (silverweed cinquefoil)
Pathway
aans03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aans00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126788182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aans03019]
    126788182
   03041 Spliceosome [BR:aans03041]
    126788182
Messenger RNA biogenesis [BR:aans03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     126788182
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     126788182
Spliceosome [BR:aans03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    126788182
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Pinin_SDK_N
Other DBs
NCBI-GeneID: 126788182
NCBI-ProteinID: XP_050370113
LinkDB
Position
3:10975248..10978006
AA seq 410 aa
MDPTKKRKLDENGVVSDTDASSAPKLDRDDARKIIERFSPDQLIDLLLDAISRHSDVLDA
VRSIADPDTAQRKLFIRGLGWDTTTEGLRSLFSAYGDLEEAIVILDKNTGKSKGYGFVTF
KHVDAAYLALKEPSKKIDGRMTVTQLAAAGNQGGGGGSATASVNPVDVSIRKIYVANVPY
EMAADKLLAHFAQYGEVEEGPLGFDKQTGKCKGYALFVYKSPEGAQKALVDPIKTIEGRQ
LNCKFASDGKKPRMGGEGGGQGQGSVGGPNAHGDGMGMAPPSSMPGQYGGPGFGYGGFSG
GQPPLGHHPLGGPGLSSVGNQGPGGGLGGPYNYGGPGSTGYGLGGAGGGGPGSGAGTGSS
LYGLPPGSGGLPSGRYPEGGPYGLSAFQNQHHQPGTSPLPRGMYPNAPYY
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggacccgaccaagaagcgcaagctcgacgagaacggcgtcgtttccgacaccgacgcc
tcctcagcccccaagctcgaccgcgacgacgcccgcaaaatcatcgagcgattctccccc
gatcagctcatcgacctcctcctcgacgccatctcccgccactccgacgtcctcgacgcc
gtccgatccatcgccgatcccgacaccgcccagcgcaagctcttcatccgcggcctcggc
tgggacaccaccaccgagggcctccgcagcctcttctccgcctacggcgacctcgaggag
gccatcgtcatcctcgacaagaacaccggcaagtccaagggctacggcttcgtcaccttc
aagcacgtcgacgccgcctacctcgccctcaaggagcccagcaagaagatcgacggccgc
atgaccgtcacccagctcgccgccgccggcaaccagggcggaggcggcggctccgccact
gcctccgtcaaccccgtcgacgtgtcgattaggaagatatatgtcgccaacgtgccgtat
gagatggcggccgataagctgctggcgcatttcgcgcagtacggcgaggtcgaggagggg
ccgctagggtttgataagcagaccggcaagtgcaaaggctacgcattgttcgtgtacaag
agccccgagggtgcgcagaaggcgctcgtggatccgatcaagacgattgaggggaggcag
ctgaattgtaagttcgctagtgatgggaagaagccgaggatgggcggcgaaggcggcggc
cagggacagggctctgtaggtggaccgaatgcccatggagatggaatgggaatggcgccg
ccctcgtcgatgcctggacagtatggagggccggggtttgggtatggagggttttcgggt
gggcagccgcccttggggcatcatcctttgggtggaccgggcctgtcgtctgtgggaaat
caggggccgggtggtgggttgggtgggccttataattacggaggacctggttctactgga
tatggtttgggtggtgctggtgggggaggacctggtagtggcgcggggactggttcgtct
ttgtatggactgccaccgggctcgggcgggttgccctctgggaggtatccggagggcgga
ccttatggcctgtctgcatttcagaatcaacaccaccagccaggtacatcaccgctgccg
aggggaatgtatcctaatgcaccttattactga

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