Argentina anserina (silverweed cinquefoil): 126789056
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Entry
126789056 CDS
T10558
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126789056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126789056
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126789056
mRNA degradation factors
5'-3' decay
Decapping complex
126789056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
PEP5_VPS11_N
WDR55
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
DUF1664
DUF5620
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
126789056
NCBI-ProteinID:
XP_050371073
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All DBs
Position
3:complement(32891885..32898932)
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AA seq
1384 aa
AA seq
DB search
MASAGNPNPPPPQHQPQPFDMAKFFKPSNPSSQSPPPQNPNPNPNPNLSSSASAFPIPPS
SYPPYSFPPQTAPFHHQQFQYQPPPPPQPQHQIPYPPPQDHHHLLQQQRSLPYPISPPPV
PASYALAAASNPSSGGNPSSGARIMALLGAPSSSLEMPPPPQQQQPELLSVPMGIPPSPA
RMPSNKLPKGRHLIGDSVVYDVDVRLAGEFQPQLEVTPITKYGSDPQLVLGRQIAVNKSY
ICYGLKQGNIRVLNIHTALRSLFRAHTQRVTDMAFFAEDVHLLASVSVEGRLFVWKISEG
PDDEGTPQITGKILIAIQIVGEGEAVHPRVCWHCHKQEVLVVGIGKRVLRIDTTKVAKGE
VPSAEDPIKCPVEKLIDGVQYVGKHDGEVTDLSMCQWMTTRLVSASMDGTIKIWEDRKSQ
PLLVLRPYDGRPVYSSIFVTAPNKPDHIILVTVGPLNREVKIWSSASEEGWLLPSDAESW
KCTQTLELKSSAQPRVEDAFFNQVIALSQAGLLLLANAKKNAIYAVHIDFGGEPAATRMD
YIAEFTVTMPILSFTGTSISPQGEQIVQVYCVQTQAIQQYALDLSKCLPPPLEFLGLEKS
DSSVSHDAIEALSTNSALKPTIQATTSEAAVSLRYPLRTVSVDAAATKDITTSSMESKPV
ASAPETNDTDVGFVVSQPLPLSPRLSGKLSGLKSPTESTHSGDQQVNEYSVDRQMNTVRS
NLSDMPAVDDESRNDEQNIVQDEVYSVPSPPMYKPPTHLVTPAELGMATSSEMTNPVDSN
TEGDAKIQDVLVNNDVGSPEVEVKIVGEARSTEIDEFSSQRELKNAVSENKEKFFCSQAS
DLGIEMARDFCAISSESYITEEVQQGDGASMSEPSAQLHFGEEDQDHSAKDVSGSATTSQ
LQTPNSKSRKQKWKNMQASGPSSPSPELLNSVESPNEGAGNLGPPSGEAAVPQDMVLLDM
MNQMMNMQTEFQKQMTKDVKRLEANLSRIEKEVKRVETAMGRSMEKTVKANNDALWARFQ
EESAKNEKQLRANSQQLSIMNNSVNKDLPVMFEKMVKKEVAAVGPAVVRAIPPAMEKAVP
LALSDCFQRGDGYKAVNQLEKLVNSKLEATVSRQIQAQFQTSGKQALQDALKSNMEASVI
PAFEKSCKTLFEQVDATFQKGMVEHTTAARQHFESANSPLAHALREAISSVSSVTQTLSG
ELADGQRKIMALAAGQGTSSAVNPLVTQLTNGPLGGLHEKVEVPLDPTKELSRLVTERKY
EEAFTGALQRSDVGIVSWLCGQVDLHGILLLQPLPLSQGVLLSLLQQLACDISNDTPRKV
LWMTDVAAAINPSNQMIAMHVRPIFEQVYQILHHQHSLPTVSSGEHASLRLLMHVINSMM
MACK
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccggcaaccccaaccctcctcctcctcaacaccaaccccaacccttcgac
atggccaagttctttaaaccctccaacccttcctcccagtctcctcctcctcaaaacccc
aaccccaaccccaaccctaatctctcctcctccgcctccgccttccccatccctccctcc
tcctaccctccctactccttccctccccaaacggcgccgtttcaccaccagcagttccag
taccagcctccgcctccgcctcagccgcagcatcaaatcccctaccctccgccgcaggac
caccaccacctcctccagcagcagcgctccctcccctaccccatctcgcccccccccgtc
cccgccagctacgccctcgccgccgcctcaaaccctagctccggcggcaaccccagttcc
ggcgcccgcatcatggccctcctcggcgctccctcctccagcctcgaaatgccgccgccg
ccgcagcagcagcagccggagcttctctctgtgccgatggggattccgccgtcgccggcg
agaatgccgagcaataagctgcccaaggggcggcatttgatcggagacagcgtggtttac
gacgtggatgttaggctggccggtgagtttcagccgcagctggaggttacgccgattaca
aagtacgggtcggatcctcagctggtgctggggcggcagattgcggtgaataagtcgtat
atatgctatggattgaagcaggggaatattcgtgttttgaatatacacactgcgttgagg
tctttgtttcgagctcatacgcagagggttacagacatggctttctttgccgaggatgtt
catcttttggctagtgtgagtgtagaaggacggctttttgtgtggaaaatatctgaaggt
ccagatgacgagggtacgccacaaattacagggaagattcttattgccattcaaatagtt
ggtgagggagaagctgtacatccacgagtctgttggcactgtcataaacaagaggttttg
gttgttgggattgggaagcgtgttctacgaattgatactactaaagttgcaaaaggtgaa
gtcccttctgctgaggatcctatcaagtgtcctgttgaaaagcttattgatggggtccaa
tatgttggtaagcatgatggagaggtgacagacttatcaatgtgccaatggatgactacc
cggctggtttctgcttctatggatggaactataaagatttgggaagatcgcaagtcacaa
ccacttttagtactgagaccctatgatggccgtcctgtttattcgtctatatttgtgaca
gctcccaacaaaccagatcacatcatacttgtaacggtgggcccacttaatcgggaagtg
aagatctggtcgtcagcaagtgaagaaggctggctacttcccagtgatgctgagtcatgg
aaatgtacccagaccttagagttaaagagctctgctcaacctcgagtagaggatgcattc
tttaaccaagtcatagcactgtcacaagctggacttcttttacttgcaaatgctaagaag
aatgccatatatgctgtgcacattgactttggtggtgagccagcagctacacgcatggat
tatatagcagaatttactgttacaatgcctattttgagctttactgggacaagtatatcg
cctcaaggtgaacaaatcgttcaggtttattgtgtccagacacaagccattcaacagtat
gcgttggacttatccaagtgcttacctcctccactggagtttttaggtctagagaagtca
gattccagtgtttcacatgatgcaattgaggcgctgtcaactaattcagcactgaaacca
accatacaagctactacttctgaagctgcagtatccttgaggtatcctctgcgcactgtt
tcggttgatgctgccgcgactaaagatattaccacttcgtctatggaatcaaaacctgtt
gcatcggcaccagagactaatgacacagatgttggttttgtagtgtcacaacctcttcct
ttgagtcctaggttgtcggggaaactttctggtttaaaaagcccaacagagagcacccat
agtggtgaccaacaagttaatgagtactcggttgacaggcaaatgaatactgttcgttca
aatttgtctgatatgcctgcagttgatgatgaatcaaggaatgatgagcagaatattgta
caagatgaagtatacagtgtgcccagtcctccgatgtacaaacctccaacccatctagta
actccggctgagcttggaatggctacttcatctgaaatgacaaatccagttgatagcaac
accgagggagatgcaaaaatccaagatgtgcttgttaacaatgatgtgggtagtcctgag
gtagaggtcaaaattgtgggtgaagcaagatctactgaaatcgatgaattcagctcccaa
cgtgaactcaaaaatgctgtttcagaaaataaggaaaagttcttttgctctcaggcatca
gatcttggaattgagatggcccgggacttctgtgcaatatcttcagaatcttacattaca
gaggaagttcagcaaggtgatggtgccagcatgtctgaaccatctgctcagctacatttt
ggagaggaagatcaagatcactctgcaaaagatgtatctgggtcagctaccacgtcgcaa
ctgcaaacaccaaattcaaagtcgaggaaacagaaatggaaaaatatgcaagcatcaggt
ccatcttccccatcaccagagttgcttaactcagtagagtcccccaatgaaggagctggg
aatttaggtcccccctccggagaagctgcagttcctcaagatatggtcttgctggatatg
atgaatcagatgatgaatatgcaaacagaatttcaaaagcagatgacaaaagatgtaaaa
cgattggaggcgaatctgagtcggatcgagaaggaagtaaaacgagtagagactgctatg
ggtcggagtatggagaagactgtaaaggctaataatgatgctctgtgggctcggtttcaa
gaagagagtgcaaagaatgagaaacaattgcgggctaattctcagcaattaagtataatg
aataactctgtaaacaaggaccttccagtcatgtttgagaaaatggtgaaaaaagaagta
gctgctgttggaccagctgttgttcgtgcgatccctccagctatggagaaagcagtacct
ttggctttatctgattgctttcagagaggagacggctacaaagcagttaatcaattggag
aaattggtcaactctaaacttgaagccactgtatccaggcaaatccaggcacagtttcaa
acttcgggtaaacaagctcttcaggatgctctcaagtcaaacatggaagcttcagtgata
cctgcttttgagaagtcatgcaaaaccttgtttgagcaagtagatgctacattccagaaa
ggaatggttgaacatactactgccgctcggcagcacttcgagtctgcgaattcaccattg
gcacatgctttaagggaagctattagctctgtatcatcagtgactcaaactctaagcgga
gaactggctgatggccaacgcaaaataatggctcttgcagctggccagggaacctcaagt
gcagtaaatcccctagtcactcaactaaccaatggacccttgggtggcctccacgagaag
gttgaagtgcctttggatccaacaaaggagctgtcgaggttggtaactgaacgcaagtat
gaagaggctttcacaggtgctctacaaagaagtgatgttgggatcgtatcatggttgtgt
ggtcaggttgatcttcatggcatactgttgctgcaacctcttcctctgagccaaggagta
cttctctcactcttgcagcagctcgcctgtgatatcagcaatgatacacctcgcaaggta
ttgtggatgacggacgtggcggctgcaataaacccaagcaaccagatgattgcaatgcac
gtgagacccatctttgagcaagtgtaccagatattgcaccatcaacatagcttgcctaca
gtctccagtggcgagcatgctagtcttcgtcttctgatgcatgtcattaactccatgatg
atggcctgtaaatga
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integrated database retrieval system
