KEGG   Argentina anserina (silverweed cinquefoil): 126789231
Entry
126789231         CDS       T10558                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
aans  Argentina anserina (silverweed cinquefoil)
Pathway
aans03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aans00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    126789231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aans04121]
    126789231
   03036 Chromosome and associated proteins [BR:aans03036]
    126789231
Enzymes [BR:aans01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126789231
Ubiquitin system [BR:aans04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126789231
Chromosome and associated proteins [BR:aans03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     126789231
    Noncanonical PRC1 (PRC1.1)
     126789231
    Noncanonical PRC1 (PRC1.3/1.5)
     126789231
    Noncanonical PRC1 (PRC1.6)
     126789231
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-RING_6 DUF4695 zf-UDP zf-Nse zf-RING_10 DUF7044 zf-C3HC4_5 ZNF512_C2HC zf-RING_11
Other DBs
NCBI-GeneID: 126789231
NCBI-ProteinID: XP_050371291
LinkDB
Position
3:2591905..2597090
AA seq 445 aa
MPAQQKRGLESAEDGDPMENHRENGHEDPPQEEESDRSRSTESSEDDEKDEYVAVRLSEI
RKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPK
YDALIAAIYPDIDKYEEEELSFHEEEKARNKQIQASIAQTFRRQSEALGRKRTTAKATAA
AFMRRSQGNYKMRRRRNHKNTFDIQGSDVNEEGNGNDGGKDSSSADEQLEPRPKRPKRWA
GARYYQPSSATANADGDDENDYEVNKAVMAASVGFIGSPERLAWGKGGMRSHTRYGSSSG
ANGKNARNRLSKLVEYLRNSEANDKGLDIHLLLVSFDEQRIPSLQRPYLCCRPTLSVGQL
CQYVAEQTALQPDEVEIYLLKELQAKVNTSDPTNAAVSTSGVLDSSKDTLLLLRDNESLA
EVQARHLTRGHLLLAYQKKWNLNRG
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgccggcgcagcagaagcgtggcttggagtccgccgaggacggtgatcctatggaaaac
caccgcgagaacggccacgaggacccgccccaagaagaagagtccgatcggagccggagc
accgagtcgagcgaggacgacgagaaagacgaatacgttgctgtaagactgtcagaaatt
cggaaagaagtgcaatgcccaatctgtctagggatcattaggaaaacacgaacagttatg
gaatgcttgcaccgcttctgcagggaatgcattgacaagtccatgcggcttgggaacaat
gaatgtcctgcgtgtcgcacacattgtgctagtcgtcgctctttgagagatgatccaaag
tatgatgcattaattgcagctatatatccggatattgacaagtatgaggaagaggaatta
tctttccatgaagaagagaaggctcgcaacaagcagatccaagcttccattgcccagaca
tttcgacgacagtctgaagcacttggtaggaagcgtacaacagcaaaagccactgcagct
gcttttatgaggagatcacaaggtaactataaaatgagacggagaaggaaccataaaaat
acgtttgacatccaaggatctgatgtcaatgaggagggaaatggtaatgacggaggaaaa
gattcatcttctgctgatgagcaattagaaccgagaccaaaaagacccaaaagatgggca
ggagctcgatattatcagccttcatcagcaactgcgaatgcagatggtgatgatgaaaat
gattatgaggtgaataaagcagttatggctgcatctgttgggtttattggcagcccagaa
aggcttgcatggggtaaaggtggcatgcggagccatacacgatatggaagttctagtggt
gccaatggtaagaatgccaggaaccgcctttcgaagctggtggaatatctccggaactca
gaagctaatgataaagggttggatatccacctcctacttgtttcttttgatgaacaaaga
attcccagcttgcagaggccatatctttgctgcaggcccaccctgtcagttggacaacta
tgtcagtatgttgcggagcaaactgcactgcaacctgatgaagtggaaatatacttatta
aaagaactacaagccaaagttaacacatcagaccctacaaatgctgcggtttctacttct
ggtgttttagattcaagcaaggatacactgcttctgttaagagacaatgaatcattggca
gaagttcaagcacgccatctcactcgcggccatctgcttttggcgtatcagaagaagtgg
aacctaaaccgtggctga

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