Argentina anserina (silverweed cinquefoil): 126789352
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Entry
126789352 CDS
T10558
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126789352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aans03036
]
126789352
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
126789352
SWR1 complex
126789352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
126789352
NCBI-ProteinID:
XP_050371449
LinkDB
All DBs
Position
3:8447653..8462118
Genome browser
AA seq
2117 aa
AA seq
DB search
MASKGPRPKLDHETKPKRHKALEVANEPKRPKAHWDHVLEEMIWLSKDFESERKWKLNQA
KKVALRASKGMLDHATRGEKKMKEEEQRMKKVALNMSKDVKKFWLKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDKPVQQCSTHNQLTIEGAAVAERDISESAE
LNDEHQSDTADGDDDYHMQSDAGSGDDENTIEKDEALFTKEERQEELAALQNEVDVPLEE
LLKQYARNKEVNKEKGKVVEEMTSSGDDDIISPEGEDDTEITSSGENHSLSSGKDEDGAE
IMSVGEDHDMCHKTGEVGSEMTSVSKDQGEQNDLPIASKTDRSSPDVFTGRRCVGINGVP
ISETHVSDIEIGEAERISEASQQPAKGYIPYDFDDEHEDGDFILAAGDEKDDETTLLEEE
ELAKADTNHPDHEIALLQKESEIPLEELLARYKKDSNSDEVADGESEYDSALSEGFMDSP
SQEDTEVKQHVSVNEDDDSGEHQPTLDSPPEEHRASDGGSDSENRIEDAATAARSAQPTG
NTFSTTKVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLA
HLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSF
HVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL
QNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISGMVEGQEKVNKEVLDRLHNVLRPFIL
RRLKRDVEKQLPMKHEHVVYCRLSRRQRNLYEDFIASSETQATLASTNFFGMISIIMQLR
KVCNHPDLFEGRPIVSSFDMNGIYMQLSSSICSMLSPGPFSMVDLKGLGFLFTHLDFSMT
SWERDEVKALATPSSLIKDRVNLMHLEDFGGFRHHKYHKKVHGMNIFEDIQKALMEERLR
QAQEHAAAVAWWNSLRCDSKPIYSTSLRDLVTVRHPVEDIAHCKANPVSYMYSSKLADIV
LSPVERFQKTIDLVESFVFAIPAARAAPPVCWCSKSESSVFLQPTYKQKCSEVLSPLLSP
FRPAIVRRQVYFPDRRLIQFDCGKLQQLAVLLRKLKSEGHRALIFTQMTKMLDVLEAFIN
LYGYTYMRLDGSTPPEERQTLMQRFNTNSKFFLFILSTRSGGVGINLVGADTVIFYDSDW
NPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRTLDNLVIQSGDYNTEF
FKKLDPMELFSGHKALPIKNMQKEKTHNSTEISLSNVDLEAALKQAEDEADYMALKKVEQ
EEAVDNQEFTEEGIVRMEDDELVNEDDMKVDEPTDQGALMMSSNKDKGMLLNGSDPNEER
TLTVACREDDADMMGDVKQMAAAAVAGQDILSFEKQLRPIDHYAIRFLELWDPIVDKTGA
ESQVRFEEREWELDHIEKYKEEMESEIDEDEEPLVYETWDAEFATEAYRQQVEALTQHQL
MEELEYEAKVKEDEADENLDSLRYGMSNGPKPKRKKKSKKAKFKSLKKRSLASELEPVKG
EQQVEPMYIDEDYLSNDLLSYSDTESPPSNVQKKRKKADSKPAGEEKSSKKKSKKLKKSH
LEICTPEFDTSVSSLHHLEASELKSCDSVVEFEHKPTSRTKMGGKISITAMPVKRVLMIK
PEKLKKGNIWSRDCIPSPDFWLSQEDAILCAVVHEYGPFWSLVSETLYGMTSGGFYRGRF
RHPIHCCERFRELIQRYVLSAPDNPNSEKVNNIGSGKALLRVTEENIRTLLNVAAEQPNS
EYLIQRHFIALLSSVWKMASHKGGRQNHSFLLNGLYFGGNYLNSSHQISWTSMKENTATI
KVTNFGQGAKLVAAALNNVSSRHEDESVFSPNPGKKSSTNAELLDLTLEFQAQKDDSTDP
FPSVINVSISDSGRPLDNKAVEPNLLRDSCKGYCKSTADANVAENRFRNATRACDEDNMG
WASSTFPTYDVRSRSVSKLPSSGKHKLVFSDPVKPSKSKFRKNAVEHGEMHQFMAEQVLP
HFPIAAPLHPSPRFDLNLPVNEDIETDDLESISHSQVAESSFEESFGVLPHKYVPGLLSG
LGDCSLLPEYDEYDDIA
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtccaaggccgaagctcgatcacgaaaccaaacccaagcgccacaag
gctcttgaagttgcaaatgaacctaaacggccgaaggctcattgggatcatgttttagag
gaaatgatctggttgtcaaaggactttgagtcggagagaaaatggaaattgaatcaggca
aagaaggtagctttaagagccagcaagggcatgctagatcatgctacgaggggagaaaag
aaaatgaaggaagaagaacaacggatgaaaaaagttgctcttaatatgtcaaaggatgtg
aagaaattctggttgaaaatagaaaaactggtgctttacaaacatcagatggagcttgat
gagaaaaagaaaaaggcccttgataaacagcttgagtttcttctaggtcaaactgagagg
tactcaacaatgttggcagaaaatcttgtggacaagcctgtgcagcaatgttccacacat
aatcaactgactatcgaaggcgcagctgtagccgaaagagatattagtgaatcagcagaa
ttgaatgatgaacatcaatcagatacagcagatggcgatgatgattatcatatgcaatct
gatgctggttcaggagatgatgaaaacacaattgagaaagatgaagctctttttactaaa
gaagaaaggcaggaagaattggcagctttacaaaatgaagtggatgttccactcgaggag
ctactgaaacaatatgctagaaataaagaagttaacaaagaaaagggtaaagttgttgaa
gaaatgacttcttctggggatgatgatattatttctcctgaaggtgaagatgacactgaa
ataacctcatcaggggaaaatcacagtttgagctcaggaaaggatgaagatggagctgaa
atcatgtctgtgggagaggatcatgatatgtgtcataaaacgggtgaagttggatcagaa
atgacctctgtgagtaaagatcaaggtgaacaaaatgatcttcctatagccagtaagact
gatagaagcagcccagatgtttttactggtcgtcgttgtgttggtattaatggtgttcct
atatcagaaacccatgtatcagatattgagattggtgaagctgaaagaatttcagaagcg
tctcagcagccggccaaaggatatataccttatgattttgatgatgaacatgaagacggt
gacttcattcttgctgctggagacgaaaaggacgatgagacaaccttgttagaggaggag
gaactagcaaaagcagataccaatcatcccgatcatgagattgcgctactgcagaaggag
agtgaaataccgttagaggaattgcttgcaaggtataaaaaggattcgaacagtgatgaa
gttgcagacggtgaatctgaatatgattctgctttatcagagggatttatggattctcca
tctcaagaagacacagaagtcaagcaacatgtttctgtcaatgaagatgatgactctggt
gaacaccagccaactcttgattctccacctgaagaacatagggcttcagatggaggaagt
gatagtgagaacagaattgaggacgcagccacggctgcaagatcagcacagccaactgga
aacacattctccacaacaaaagttcgtacaaagttcccatttcttcttaagttccctctc
cgtgagtatcagcatattggtttggattggcttgtaacgatgtatgagaaaaggctgaat
ggtattctagccgatgagatggggttggggaagacaatcatgacgatcgctttgcttgca
cacttggcctgtgaaaagggcatatggggtcctcatcttattgtggtcccaaccagtgta
atgctcaattgggagactgagtttctaaaatggtgccctgcttttaaaatcctgacttat
tttggaagtgcaaaagagcgcaaattgaagaggcaaggctggctgaaaccaaactcattt
catgtctgcataacaacatacaggctggttatacaagatgcaaaagtcttcaagcgtaag
aaatggaagtacttgattttagatgaagcccatctgattaaaaattggaagtcacagaga
tggcaaacacttttgaacttcaattccaaacgacgcattttgttaacaggaactcctcta
cagaatgatctcatggaactttggtctctaatgcatttcttgatgcctcacatatttcag
tctcatcaggagttcaaggattggtttagcaatccaatatccgggatggttgaggggcaa
gaaaaggtaaataaagaagttcttgatcgtttacataatgtcctccgcccgttcattctc
cgccgcctgaaaagagatgtggagaagcagttgcctatgaagcatgagcatgtggtatac
tgtagactatccaggaggcaacggaacttgtatgaagactttattgcaagctcagaaaca
caagcaactctggcaagtaccaacttctttggaatgataagtataataatgcaacttcgt
aaagtttgcaatcatcctgacttatttgaaggtcgtccaattgtcagttcctttgatatg
aatggtatttacatgcaactgagttcttcaatatgttcaatgctttcgcctggaccattt
tctatggtagacctcaaggggttggggtttctatttactcatctagattttagcatgaca
tcttgggagagggatgaagttaaagctcttgctaccccatcaagtttgatcaaagaccgt
gttaatttgatgcatcttgaagattttggtggattcagacatcataaatatcataagaag
gtccatggtatgaatattttcgaagacatccagaaggcgcttatggaggagagactaaga
caagcacaagaacatgctgcagcagttgcttggtggaattccttgagatgtgatagcaaa
cccatatattcaacaagcttgagggatcttgttacagtcagacatcctgttgaagatatt
gctcattgcaaggctaaccctgtgtcatatatgtactcctctaagcttgctgatatagtt
ctttcaccagttgagcgcttccagaaaacaattgacctggttgagagctttgtctttgca
atccctgctgcacgagccgccccacctgtatgctggtgcagtaaatctgaaagttctgtg
tttctgcaaccaacttacaagcagaagtgctctgaagtcttgtcgccacttctgtcgccg
tttagacctgcaattgtccgcagacaagtatattttccagataggcgactaatacagttc
gactgtggtaaattgcagcagcttgctgttttgcttaggaaattaaagtcagaaggtcac
agagctttgatattcactcagatgacaaagatgcttgacgttttggaggctttcatcaat
ctatatggttacacatacatgcgtttagatggatccactccacctgaggagaggcaaact
ttgatgcagcggtttaacacaaactcaaaatttttcctttttatattgtcaactcgtagt
ggaggtgttggtatcaacctggttggggcagatacagttatcttttatgatagtgactgg
aatcctgctatggaccaacaagctcaagatcgttgccaccgtattggacagacaagagaa
gttcatatctatcgcttgatcagtgagagcaccattgaagaaaatattttgaagaaagca
aatcagaagaggactcttgacaatctagttatacaaagtggggactacaacactgaattc
ttcaagaagcttgatcctatggagcttttttctggtcataaagcccttcccattaagaat
atgcaaaaggagaaaactcacaattctactgaaatttctctatctaatgtggacctggaa
gctgcgttgaagcaggcagaagatgaagcagattatatggctttaaagaaagttgagcag
gaagaagctgtggacaaccaagaatttactgaagaaggcattgtgagaatggaagatgat
gaattagtgaatgaggacgacatgaaggttgatgaacccactgatcagggggctttgatg
atgtcttcaaacaaagacaagggaatgttgttgaatgggagcgatcctaatgaagaaaga
actcttactgttgcttgtagggaagatgatgcagacatgatgggtgatgtcaaacaaatg
gctgctgctgctgtcgcaggacaagatatcttatcatttgaaaagcagttgcgtccaata
gatcattatgcaattcgttttcttgaattgtgggacccaatagtagacaagacaggagca
gaatctcaagttagatttgaggagagagagtgggaattggaccacatagaaaaatacaag
gaggaaatggaatctgagattgatgaggatgaggaacctctcgtatatgaaacatgggat
gctgaatttgcaaccgaggcatatcgtcagcaggttgaagccttgacacaacaccagttg
atggaggaactggaatatgaagccaaggtgaaggaagatgaagcagatgaaaaccttgat
tctctgagatatgggatgtcaaatggacctaaacccaagcgtaagaagaaatcaaagaaa
gcaaaatttaaatctctgaagaaacggtctctagcttctgaactggaacctgttaaagga
gagcagcaagtggaacctatgtatatagacgaagattatctctctaatgatctgctttca
tattcagataccgaatcacctccttcaaatgtgcagaaaaaacgcaagaaggctgattct
aaaccagctggtgaagaaaagagttcaaagaagaagtctaagaaattgaagaagtcccat
cttgaaatctgtactccagagtttgatactagtgtctcgtcactgcatcatcttgaagct
tcagagttaaaatcatgtgatagtgtggttgaatttgagcataaaccaactagtagaacc
aaaatgggagggaagatatccatcactgccatgcctgtaaagcgagttctaatgataaaa
ccagaaaagctaaagaagggaaacatttggtctagagattgcattccatcaccagacttt
tggttgtcacaggaggatgcaattttatgtgctgtggtacatgagtatggtcctttttgg
agtttagtgagtgagacactttatggtatgacttctggtgggttttatagggggagattt
cgccatccaattcattgctgcgagaggtttagggagcttatccaaagatatgttttatcc
gcaccagacaatcctaattctgaaaaggtcaacaatataggatctggaaaagctctttta
agagtaacagaggaaaatattcggacattattgaatgttgctgctgagcagcccaattca
gaatatttgattcagagacatttcattgctctgctatcatctgtctggaagatggcatct
cacaaaggaggcagacaaaatcattcatttttgttgaatggcttatattttggtggaaat
tatttgaattcttcccaccaaatttcttggacttcaatgaaggaaaacactgcaaccatt
aaagttaccaattttggacagggtgccaagttggtagcagcggcacttaataatgtcagc
agcaggcatgaagatgagagcgtcttttcccccaacccggggaaaaaatcgtcaaccaat
gctgaactgttggatctaactctggagtttcaggcacaaaaggatgactccacggatcca
tttccatctgttatcaatgtatcaatatcagattcaggccgtccattagataataaggca
gtggaaccaaatcttctcagggactcctgtaaaggctactgcaaaagcaccgctgatgca
aatgttgctgagaatcgtttcaggaatgcaacaagagcttgcgatgaagataacatggga
tgggcttcatccacattcccgacatatgatgtcaggtctcgatcagtgtcaaagttacct
tcctcaggaaagcacaagcttgttttctccgatccagtcaaaccttcaaaatccaagttc
aggaaaaatgcagtagagcatggtgagatgcatcaatttatggctgagcaggtgcttcca
catttcccaatagctgcacccctgcatcccagtccaaggtttgacctgaacctgcctgtc
aacgaggacattgaaactgatgatctcgaaagcatttcccattctcaggtggctgagtct
tcatttgaagaaagctttggagttctcccgcataaatatgttcctgggttgctttcaggc
cttggtgattgttcattgttgccagaatatgatgaatatgatgacattgcgtaa
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integrated database retrieval system
