Argentina anserina (silverweed cinquefoil): 126789831
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Entry
126789831 CDS
T10558
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03410
Base excision repair
aans03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126789831
03450 Non-homologous end-joining
126789831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aans03400
]
126789831
Enzymes [BR:
aans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126789831
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
126789831
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
126789831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
HHH_5
NTP_transf_2
Cdd1
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
126789831
NCBI-ProteinID:
XP_050371844
LinkDB
All DBs
Position
4:complement(26688810..26693044)
Genome browser
AA seq
502 aa
AA seq
DB search
MAPKRATQSESPPPSDPHGIFAGMVVFLVEDGVQNRRLQIWKQKLVQMGATIEDHLSKRV
THIFAMNPEAVLQKVGIDHWDRFEGRVVLYQWLEDSLSSGKRVPEDLYHLKLESDKSSSE
YISSDEETPNPKKRRFSSPDELPHTPIQKTPKALNKDQVAALDSSRPYSPPDLNRDITEI
FGKLINIYRALGDDRRSFSYHKAIPVIEKLPFKIENAEQVKGLPGIGKSMQDHIQEIVTT
GKLSKLEHFETDEKVKTITLFEEIWGVGPATALKLFEKGHRTLDDLKNEDSLTHSQKLGL
RYYDDIKQRIPRHEAQEMELLLQKAGEDVLPGVVVVCGGSYRRGKATCGDLDIVITHPDG
NSHKGFLPKYVNHLKDMKFLREDLVFVTHSEEGTDSGVDTYFGLCTYPGRELRHRIDFKV
YPREIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLFPATHGSGGKRGAKAGASLKF
DAEKEVFDFLGFPWLEPHQRNL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaaagagcaacccaaagtgaaagtcctccaccgtcagatcctcacggaatc
ttcgccggaatggtcgtcttcttagtggaagacggagttcagaaccgtcgcttacagatt
tggaagcaaaaactggttcaaatgggggctactatagaagatcatctatccaaaagggtc
acacacatatttgcaatgaacccagaagccgtattgcaaaaagtgggcattgatcactgg
gatcgctttgaaggaagagttgtactctatcagtggctggaggacagcttgagctcaggg
aaaagagtaccagaagatttgtaccatctgaaattggagtcagacaaatcttctagtgaa
tacatttccagcgatgaagaaaccccgaatccgaaaaagagaagattctcctctcctgat
gagttgcctcatactccaatccagaaaacccctaaagccctgaataaggatcaggtcgca
gcattggattcatccaggccctacagcccacctgatttaaatagagacataaccgagata
tttgggaagcttatcaacatatatagagcattgggggatgatcgacgatcttttagctat
cacaaggctataccggttatagagaagttgcctttcaagattgaaaatgcagaacaagtt
aagggccttcccggcattggaaagtcgatgcaagatcatattcaggaaatagttactact
ggaaagctatccaagttggaacactttgaaacagatgaaaaggtaaaaacaatcacctta
ttcgaggaaatatggggtgtaggtccagctactgcactaaaactatttgagaaaggtcat
cgaacattagatgatttaaagaatgaagattcattgacacattcacagaagttgggtttg
aggtattatgatgatatcaaacagaggatcccgcggcatgaggctcaagagatggagctt
cttctacagaaagctggcgaagatgttttgcctggggtggttgttgtatgtggagggtca
tatagacgcgggaaggctacttgtggagatctggacattgtaattactcatccggatggg
aacagtcataaaggtttcttaccaaagtatgtgaatcatctaaaggatatgaagttccta
agagaggatttggtttttgttacacacagcgaagagggtactgattctggtgttgacaca
tattttgggctttgcacatatcctggacgagagctgcgacaccgtatagattttaaggtc
tacccacgggagatatatgcatttggactaatagcttggacagggaatgatgtgctgaat
agaaggttgaggttactagctgaatcaaaaggattcaggcttgacgatacagggctgttt
ccagccactcatggatctggcggtaaacggggggcaaaagctggtgcaagcttgaaattt
gacgcagaaaaggaggtattcgactttcttggatttccttggctggaaccacaccagaga
aatctgtga
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