Argentina anserina (silverweed cinquefoil): 126789880
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Entry
126789880 CDS
T10558
Name
(RefSeq) vacuolar sorting protein 39
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04148
Efferocytosis
Brite
Membrane trafficking [BR:
aans04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
126789880
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GFIT
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NCBI-GeneID:
126789880
NCBI-ProteinID:
XP_050371906
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Position
1:complement(6447633..6452900)
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AA seq
1009 aa
AA seq
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MVHSAYDSVELISDCPTKIEAVESYGPKLLIACSDGSLRIYAPDSSGSRSPPSDHHTLSL
LKEPYSLERNLAGFSKKPLLSMEVLQSRELLLSLSETISFHGLPNLGTIAVITKAKGANV
YSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMAWCGENICIGIRRDYT
ILNSTTGALTDVFPSGRLAPPLVVPLPSGELLLGKDNIGVFVDQNGKLAHQGRVCWSEAP
TVVVIQKAYGIALLSRYVEVRSLRAPYPLIQTVVLRNARRLLQTNNAAIVALDYAVYGLF
PVPLGAQIVQLTASGEFEEALSLCKLLPPEEANLRAAKEASIHIRCAHHRFDTGDYEDAM
EHFVASQVDITYVLSMYPSIVLPKTTMIADPDKLMDISADSSYLSRGSSGLSDEMEPSAL
SHVLESEESAALESKKMSHNTLMALIKFLQKKRFSIIERATAEGTEEVVFDAVGDHFASH
GSNRYKKTNKGRSSIPVTSRSREMAAILDTALLQALLLTGQSSGALELLKGLNYCDLKIC
EEILLKSNHHAALLELYKCNSMHHEALKLLHQLVEESKSNQVQPEVIQKIKPEAIVEYLK
PLCGTDPMLVLEYSMLVLESCPTQTIELFLNGNIPADLVNSYLKQHAPNMQARYLELMLA
MDENGISGNLQNEMVNIYLSEVLDWYAELSAQHKWEEQTYSLTRKKLLSVLESISGYSPE
ALLKRLPADALYEEHAVLLGKMNQHELALSIYVHKLHLPEMALSYCDRVYDSLAHQPSSK
SSANIYLTLLQIYLNPKRTTKNFERRITNLVSPQNIGTPKVGSANTVKSRGGRGAKKIAA
IEVADDIRVGQSGTDSSRSDGDADADADESGEEGGSTIMLDEILDLLGRKWDRINGAQAL
KLLPRETKLQNLLPFMGPLLRKSSEAYRNLSVIKSLRQSDNLQVKQELYEQRKGVVKITG
DSMCSLCRKKIGTSVFAVYPNGSTIVHFVCFRDSQSMKAVGRGSPLRKR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggttcacagcgcctacgattccgtcgagctcatctccgactgccccaccaagatcgaa
gccgtcgaatcctacggccccaaactcctcatcgcctgctccgatggatccctccgaatc
tacgctcctgattcctccggctcccgctcccctccctccgaccaccacaccctatccctc
ctcaaggagccttactccctcgagcgaaacctcgccggcttctccaagaagcctcttctc
tccatggaggtcctccagtcccgcgagctcctcctctccctctccgaaaccatatccttt
cacggcctccccaatctcggcaccatcgccgtcatcaccaaggccaagggcgccaatgtc
tactcctgggacgaccgccgcggcttcctctgcttcgccaggcagaagagagtctgcatt
ttccgccacgacggtgggagaggtttcgtggaggtgaaggagttcggagtgccggatgtg
gtcaagtctatggcgtggtgtggggagaatatatgtatagggatcaggagagattatacg
atactgaattccactactggtgcattgactgatgtgtttccttcagggaggcttgcgccg
cctttggtggttcctcttccctccggcgagcttctcctcggcaaggataacattggggtt
tttgtggaccaaaatgggaaacttgctcatcaaggcagggtttgttggtcggaggcgcct
acggtggtggttattcagaaggcctatggaatagctttgttatcgagatatgttgaggtt
cggtccctacgagcgccgtatccattgatacaaacggttgtcctgagaaatgctcgtcgt
cttctccagaccaacaatgctgccattgttgcattagactatgctgtgtatggtctcttc
cctgtccctcttggtgcccagattgtacaattaacagcatctggcgagtttgaggaagct
ctgtcattgtgtaagctgcttccgccagaagaagcaaaccttagagctgcaaaggaggct
tcaatccatataaggtgtgcccaccatcgttttgatactggggactatgaggatgccatg
gagcattttgtggcttctcaagtagatataacctatgtactttctatgtatccttccatt
gttcttcccaagacaaccatgatagctgatccagacaaactgatggatatatctgcggac
tcatcatatctctctagaggttcatctggtttgtcagatgaaatggaaccctccgctctg
tcacacgtgctggaatcagaagagagtgcagccctagagtccaaaaaaatgagccataac
actctcatggctctcattaagttcctgcagaaaaagagattcagcattattgaaagagct
actgctgaggggacagaagaggttgtttttgatgctgttggagaccattttgcttcccat
gggtctaataggtacaagaagacaaacaaggggcgtagcagcattccagttacctcccgt
tctagggagatggcagctatactggatacagctctactccaagctctacttcttactgga
caatcttcaggggccttggaattactgaaaggtcttaactactgtgatttaaaaatatgc
gaggagattctcctaaaaagtaatcatcacgctgctttgttagaactttacaagtgcaac
tcaatgcaccatgaagctctaaaactattgcatcagttagtagaagagtcaaaatctaat
caagtgcaacctgaggtaatccaaaagataaagccagaggcaattgttgaatatctcaag
cctctttgtggcactgatcccatgcttgtcttggagtactcgatgcttgtccttgagagt
tgcccaacacagacaattgagctctttctgaatggaaatattccagctgatttggtaaac
tcttatttgaagcaacatgctccaaacatgcaggccagatacttggaacttatgcttgct
atggatgaaaatggaatctctgggaatctgcagaatgaaatggtaaatatctatctatca
gaagtactcgactggtatgcagaattaagtgctcagcataaatgggaggagcaaacttac
tccttgacgagaaagaaattattgtctgtattagagagtatatcaggttatagtccggag
gctttgctgaaacgacttccagctgatgctttatatgaagagcatgcagttctgttgggc
aaaatgaatcagcatgagctagccttgtccatatatgttcacaagcttcatcttcctgag
atggcactatcctattgtgatcgagtgtatgactcattggcacatcaaccgtcttcaaaa
tcgtctgccaatatataccttactctattgcaaatttatcttaatccgaagagaacaacc
aagaactttgagaggcggattacaaatttggtatcaccgcagaacataggaacaccaaag
gttggttctgcaaatacagttaaaagtagaggaggtagaggagctaaaaaaattgctgct
atagaggtggcagatgacataagagtcggtcaaagtggcactgacagtagtaggagtgat
ggtgatgctgacgcagatgcagacgagtctggtgaggaaggagggtcaacaatcatgctt
gatgagattcttgatttgttgggcagaaagtgggacagaataaatggagctcaagctctc
aaacttttacccagggagaccaaattacagaacttgcttccgtttatgggacccctcttg
aggaaatcaagtgaagcttacagaaacctgtcagtgataaaaagtttaagacaaagtgat
aacctgcaggttaagcaagaactctacgaacaaaggaaaggtgtggtaaagatcacaggc
gacagcatgtgttccctttgcagaaagaaaatagggacaagtgtttttgctgtgtatcca
aatgggagtacaatagtgcattttgtttgcttcagagactcccaaagtatgaaagccgtg
ggcagaggatcgcccctaaggaagcgatga
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