Argentina anserina (silverweed cinquefoil): 126790040
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Entry
126790040 CDS
T10558
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126790040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aans03009
]
126790040
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126790040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
126790040
NCBI-ProteinID:
XP_050372124
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Position
4:complement(12355098..12357499)
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AA seq
564 aa
AA seq
DB search
MSLISQNIPSAFNSSKSKREVPDEPAFMQANDGNEDGKEMSLDVMRVNKRKKARNEVDEK
DLVEQEKEMKKLESFLFGNIYAPVEFGKEDEDEAGDAVDNGSSLFFVDRSANNVLSVDED
DGEVLEEETKQRKAVWEDDEEAKANVNIAKVNRLRKLRKEEDESLISGSEYVSRLRAQHV
KLNPGTEWAQLDSEPRSTRYSDDESSDDDYTAVVAHGYKDIGAADDLLRTNEDFVVKSSS
KLLPGLLEYSILTDANAEEPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQIDGKRNAKIE
SIFIDDCPIRKAAFLPDGSQVIIAGRRKFFYSFDLVKAKVDRIGPLVGREEKSLEVFEVS
PDSSTIAFVGNEGYILLVSTKTKELIGTLKMNGTARSLAFSEDGKQLLSSGGDGQIYHWD
LRTGACFHKAVDEGCINGTSLCTSPSGKLFAAGSDSGIVNIYNREEFLGGKRKPIKTIEN
LTTKVDFLKFNTDSQILAICSSMKKNSLKLVHVPSLTVFSNWPPQKKTLHYPRCLDFSPG
GGFMAMGNAAGKVLLYKLHHYHDA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatatcgcagaatatcccttcggcttttaactcgagcaagagcaaaagggag
gttcctgatgagcctgcgttcatgcaagcgaatgatgggaatgaagatgggaaagaaatg
agtttagatgttatgagggtgaacaagagaaagaaagcgcgcaacgaggttgatgagaaa
gatctggtggagcaagagaaggaaatgaagaagctggagagctttttgtttggaaacatt
tatgccccggtggagtttgggaaggaggatgaggatgaagcaggagatgcagtggataat
ggctcttcactgttctttgtggatcgttctgcgaataatgtgctttctgttgatgaagac
gatggagaagtattggaggaagaaactaagcagaggaaagctgtctgggaggatgatgaa
gaggcaaaggccaacgtgaacattgccaaagttaatagattaaggaagctgaggaaggaa
gaggatgagagtttgatttctggttctgagtatgtttcaagattgagggcacagcatgtt
aagctgaaccctggaaccgagtgggctcaacttgattcagagccaaggagcactagatat
tctgacgatgaatcatcagatgatgattatacggcagtagtagcccatggctacaaggat
attggagctgctgatgatctccttcgaacaaatgaggattttgttgtgaagagcagttca
aagttgttgcctgggcttcttgaatattcaatactgacagatgcaaacgcagaagaacct
tctaatggtcctataaattcggtgcagtttcatagaaatgctcagttgcttctgactgct
ggattggatcgaaggcttaggtttttccagattgatggtaaacgtaatgctaaaatcgaa
agcatcttcattgatgattgtccaatccggaaggcagcttttttgcctgatggctctcag
gttattatagctggaaggaggaagtttttttacagctttgatttagtgaaggccaaagtt
gatcggataggaccccttgttggtagagaggaaaagagcttggaagtttttgaggtttcc
cctgattctagtacaattgcctttgtgggaaatgaaggatatatcttgttggtttccact
aaaactaaggaattgattgggacactgaagatgaatggaactgctcgttctttagctttt
tctgaagatgggaagcaattattgagctctggcggagatggacagatttaccactgggat
ttgagaaccggagcttgcttccataaggctgttgatgaaggttgtataaatggcacttct
ctgtgtacatctccaagtggaaaactgtttgctgctggttcagacagcgggattgtcaat
atctacaacagggaagagttcttaggaggcaagaggaaacctatcaagacaatcgagaat
ctcacaaccaaagtagattttctaaagttcaataccgattctcaaatcctggctatctgt
tcaagcatgaagaagaacagcttgaagttggtacatgttccatcattgactgtcttctct
aactggcctccgcaaaagaagaccctgcactatccccggtgcttggatttcagtcctggt
ggaggtttcatggccatgggaaatgctgctggaaaagtgttgctttacaagttgcaccac
tatcatgatgcataa
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integrated database retrieval system
