Argentina anserina (silverweed cinquefoil): 126790111
Help
Entry
126790111 CDS
T10558
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126790111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aans03041
]
126790111
03009 Ribosome biogenesis [BR:
aans03009
]
126790111
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126790111
Spliceosome [BR:
aans03041
]
Complex A
U1 snRNP components
U1 related factors
126790111
Complex B
126790111
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
Pre-60S particles
Helicases
126790111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Transformer
AAA_19
ERCC3_RAD25_C
RSRP
Motif
Other DBs
NCBI-GeneID:
126790111
NCBI-ProteinID:
XP_050372207
LinkDB
All DBs
Position
4:18462168..18467995
Genome browser
AA seq
1093 aa
AA seq
DB search
MATAEAASGPRYAPDDPTLPKPWKGLIDGSTGVLYYWNPETNITQYEKPALAALATTPKM
AAIPNGAVPQQHGHLMGQQVYTQQQSLQAVQQIGQVAQQHMMQHPSQQMMQHPGQQVNPA
SAQQGGQQAPHPLGQQVPQSQNSQVPQAQVQQYSHQQQLQYMAYQHSSLPQGQQQTPYSA
QGQASANQQPAYAPREEHDYQHRNQSGFSPSQFQQVGASSVQNPPTGNSLVQMPPRAVHP
TQPQKFGLGNMQQPSSFGHQQQSGTDLVHHQHGSRFQNQMDPAMIHGQQSNMPPLGSRRS
VENNLQGRVGNEYYSNGNYEGPTVTQQAKLAAMPVTTARSQQDMGISGVPFQNPAPSQGM
HNMYSHATGGPPFSNNALVKPSYVGPTNVPGLSPVQAYLQQYEVSATGDNVPAPFMTFED
TGFPPEILRDIYSAGFASPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLMPAFMLLRQ
RRNNSQDGPTVLVLAPTRELATQIQEEVLKFGRASRISCTCLYGGAPKGPQLKELDRGAD
IVVATPGRLNDILEMRKINLGQVSLLILDEADRMLDMGFEPQIRKVVNEIPSRRQTLMFT
ATWPKEVKKIASDLLVNPVQVNIGNVDELAANKSITQYVEVVPQMEKERRLEQILRTQER
GSKVIVFCSTKRLCDQLTRNIGRTFGAAAIHGDKSQGERDYVLNQFRSGKCPILVATDVA
ARGLDIKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGISYTFFSEQDWKYAADLIKVLE
GANQQVPPEVRDIALRGGPGFGKDRGAMNRFDSGSGGGMRDGGFGGRGGMRDGGYGGRGG
MRDGGYGGRGGMREVDGNFGGRGGMRDGNFGGPRDGAVNNRGGRNDFFGGRGNRGRGFRG
PGGGQAGFGRNDRGSNDRYDNMDTRGRGGGHGRFDNRIDHADRGRGRIRSPETVRTWGGY
SSSRSRSRSRSRSRSRSRSRSYRQKSRSWTRSRSRSRSRSYSRGRGRSYSASPSRRRNRS
RSPSYERYDRPRDQNIDKEEPAIPKTEVPSQPGMSPMSPGTLVEASPSTKIQGEFPVVKE
EIKQELEDAHITQ
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcggaggcagcctccgggccacggtatgccccggatgatccgactctgccg
aaaccttggaagggcttaattgatggcagcaccggcgtgttgtactattggaatccggaa
accaacattactcagtacgagaagccggctttggctgcgctcgccaccactcccaagatg
gctgcgattccgaatggggctgtgcctcaacagcacgggcatttgatggggcaacaggtg
tatacccaacagcagagtttgcaggctgtgcaacagattggacaagtggcgcagcagcat
atgatgcagcatccgagtcagcagatgatgcagcatccgggtcagcaggtgaacccggca
tcagcgcagcagggaggacagcaagctccccacccactgggtcaacaagtgccacaaagt
cagaactcacaagtgcctcaagcgcaagtgcagcaatattcacatcagcagcaactgcag
tatatggcttatcagcacagcagtcttccccaggggcagcaacagactccgtatagtgca
caagggcaagcatctgcaaatcaacaacctgcatacgcacctagagaggagcatgattat
cagcacagaaatcaaagtggtttttctccttctcagtttcaacaagtgggggcctcatct
gtgcagaatccccctaccgggaattctttagtacaaatgccaccgagagctgttcatccc
actcaaccccagaaattcggtttgggaaatatgcaacagccttcttcttttggccaccag
caacaatcaggaactgacctggtgcaccatcaacatggttctaggtttcaaaatcaaatg
gacccagcaatgattcatggtcagcagtctaatatgcctcctcttggttcaaggaggagt
gttgaaaataatttacagggtagagttggaaatgaatattactcaaatggtaactatgaa
gggccaacggtcactcagcaggcaaagcttgcagctatgccagtgacaactgcaagaagt
cagcaggatatgggaatcagtggtgtcccatttcaaaaccctgcacctagtcagggcatg
cataacatgtacagtcatgcaacaggtggtcctccattctcaaacaatgctctggtgaag
ccttcatacgtcggaccaacaaatgttcctggcctctcacccgttcaagcttatcttcaa
caatatgaagtttctgcaacgggtgacaatgttcctgcaccattcatgacttttgaagat
actggctttccgccggagatactgagagatatatattctgctggctttgcatctccgaca
ccaattcaagcacaaacgtggcctattgctcttcaaagtagagatatagtagctattgca
aagacaggctctggaaaaacattgggctatttgatgcctgccttcatgcttcttagacaa
cgccgtaacaattctcaggatgggccgacagtgttggttttggctccaacaagggagctt
gcaacacaaattcaagaggaggttttgaaatttggccgagcttccaggatatcctgcacg
tgcttgtatggtggagctccaaagggtcctcagctaaaagaattagatcgtggagcagat
atagttgttgcaactcctggtcgactcaatgacatactggaaatgaggaaaatcaatctg
ggccaagtatcccttcttatacttgatgaggcagatcggatgcttgacatgggatttgaa
cctcaaattcgtaaagttgtgaatgaaataccttcacgcagacagactctaatgttcaca
gcaacctggcctaaagaagtaaaaaaaatagcaagtgatcttcttgttaatccggtccag
gtgaatattggcaacgttgatgagcttgctgcaaataagtctatcactcagtatgttgaa
gttgtccctcaaatggagaaagagaggcgcttggagcagatccttagaacacaggaacga
ggttctaaagttattgtgttttgttccacgaagaggttgtgtgatcagcttacacgtaat
attggtcgtacctttggggctgctgccattcatggtgacaaatctcaaggtgagagagac
tatgtcttgaatcagttccgtagtggaaagtgcccaatcttagttgcaacagacgtcgcc
gcccgtgggcttgacatcaaagatataagggtggtggttaactatgattttcctaatggg
gttgaagattatgttcaccgtattggacgtactgggagggctggggcaactgggatctcg
tacacctttttctctgagcaggactggaaatatgcagctgatttaataaaagttcttgaa
ggagctaaccagcaagtgcccccagaggtacgagatattgctctgcgtggtgggcctggt
tttggcaaggacaggggtgcaatgaaccgttttgactctggtagcggtggcggaatgagg
gatgggggctttggcggtcgtggtggcatgagggacgggggttatggtggtcgtggtggc
atgagggacgggggttatggtggtcgtggtggcatgagggaagtggatggcaactttggt
ggacgtggtggcatgagggatggcaactttggtggtcctagggatggggctgttaacaac
cgcggtggaagaaatgatttctttggcgggcgtggaaacaggggccggggattcaggggt
cctggtggtggtcaagctggttttggtagaaatgaccgtggctcaaatgatcggtacgac
aatatggatacccgtggaaggggaggtggtcatggaagatttgataatagaattgatcat
gctgataggggcagaggcagaattcggagccctgaaacagttcgaacatggggaggttat
agcagtagtcggagtcggagccgaagccgtagtagaagccgtagccgaagccgaagtcgc
agttatcgtcaaaagagccggagttggacaaggagtcgtagtaggagtcgtagtcggagc
tatagccgtggtcgtggacgtagctatagcgctagccctagtcgtcgtcggaaccgtagt
cgcagtcctagttatgaaagatatgacagaccccgtgatcagaacattgataaggaggaa
cctgcaattccaaaaactgaggttccatctcaaccaggaatgtctcccatgtcccctggc
acactagttgaagcatctccaagtaccaagattcagggggaatttccagtggttaaggaa
gaaattaaacaggagctggaagatgcccatatcactcagtga
DBGET
integrated database retrieval system
