Argentina anserina (silverweed cinquefoil): 126790168
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Entry
126790168 CDS
T10558
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126790168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126790168
03110 Chaperones and folding catalysts [BR:
aans03110
]
126790168
03029 Mitochondrial biogenesis [BR:
aans03029
]
126790168
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aans04147
]
126790168
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
126790168
Messenger RNA biogenesis [BR:
aans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
126790168
Chaperones and folding catalysts [BR:
aans03110
]
Heat shock proteins
HSP60 / Chaperonin
126790168
Mitochondrial biogenesis [BR:
aans03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
126790168
Exosome [BR:
aans04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126790168
Exosomal proteins of other body fluids (saliva and urine)
126790168
Exosomal proteins of breast cancer cells
126790168
Exosomal proteins of colorectal cancer cells
126790168
Exosomal proteins of bladder cancer cells
126790168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
126790168
NCBI-ProteinID:
XP_050372279
LinkDB
All DBs
Position
4:4006685..4011301
Genome browser
AA seq
574 aa
AA seq
DB search
MYRFASSLASKARVARNGAHQIGGRLSWSRNYAAKDIKFGVEARALMLNGVEDLADAVKV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATILTRAIYTEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGKTLYNELEVVEGMKLDRGYISPHFITNPK
NQKCELEDPLVLIHEKKISNINAVIKVLELALKKQKPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSNMQDLAVLTGSTVITEELGLNLEKVDLAMLGTCKKVTISKDD
TVILDGAGDKMALEERCEQIRSAVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELDKLSTANFDQKTGVQIIQNALKA
PVHTIACNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SISSLLTTTEAVVVDLPNDKETPAMGGGMGGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcttcgcttcaagcctcgcttccaaagctcgggttgctaggaacggtgcccat
cagattggtggtaggttgagttggagcagaaactatgcagctaaagatattaaatttggg
gtggaggcccgagccctcatgctcaatggtgttgaagacctagctgatgctgttaaagtc
acaatgggtcctaaggggcgcaatgtggttattgagcaaagctatggtgcacccaaagta
acaaaagatggtgtgaccgttgcaaaaagtattgagtttaaggataaagttaagaatgtt
ggagctagccttgtaaaacaggttgctaatgcgacaaatgatgtagcaggtgatggtact
acttgtgctacgatcctgaccagagctatctacactgaaggatgcaaatctgttgctgct
ggtatgaatgctatggacttaagacgtggtattaccatggcagttgattctgtagtaacc
aacttgaagagcagagccagaatgataagcacttctgaagagatagcgcaggttggaacg
atatcagcaaatggcgagagggaaattggtgaattgattgcaaaggccatggagaaggtt
ggcaaggagggagtaatcacgattgctgacgggaaaacattgtataacgagttggaagtt
gtcgagggcatgaagctagaccggggctatatatctcctcatttcatcaccaacccgaaa
aatcagaaatgtgaattggaagatccactggttctaatccatgagaagaaaatctcaaat
attaatgctgtgattaaagtattggagttggctctgaagaagcaaaagcctttactaatt
gtcgcagaagatgtggaaagtgatgcacttgcaacacttatattaaataagcttcgtgct
ggaatcaaggtctgtgcaatcaaagcccctggttttggtgaaaataggaaatccaatatg
caggatcttgcagttctcactggtagcacagttatcactgaagagctgggtttgaacctc
gagaaagtggacttggctatgcttggaacttgcaaaaaggtcacaatttcaaaagatgac
accgtgattcttgacggtgctggtgacaagatggcacttgaggaaagatgtgaacagatt
cgctcagctgttgaagcaagcacttccgattatgacaaagagaaattacaagagcgactg
gcaaaactttctggtggtgttgctgtattgaagattggaggagctagtgaagctgaagtt
ggtgagaagaaggacagagttactgatgccctgaatgccaccaaggcagctgttgaagag
ggtattgtaccaggtggtggtgttgcactcctctatgcagctaaagagttggacaaactt
tcaactgctaactttgatcagaagactggagttcagatcattcagaatgcactaaaggca
cctgtccacacaattgcatgtaatgctggagttgaaggagctgttgttgtcggtaagctc
ttggagcaagataatcctgatctgggatatgatgcagctaaaggtgaatatgttgatatg
gtaaaagctggtatcatagacccattgaaagtgattaggactgctctagtggatgctgca
agtatttcatctttgctgacaaccactgaagccgtcgtggttgatcttcctaatgacaag
gagaccccggcaatgggcggtggcatgggaggaatggattattga
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