Argentina anserina (silverweed cinquefoil): 126790241
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Entry
126790241 CDS
T10558
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03440
Homologous recombination
aans03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126790241
03460 Fanconi anemia pathway
126790241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aans03032
]
126790241
03400 DNA repair and recombination proteins [BR:
aans03400
]
126790241
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126790241
DNA replication proteins [BR:
aans03032
]
Eukaryotic type
DNA Topoisomerases
126790241
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
126790241
FA (Fanconi anemia) pathway
126790241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
126790241
NCBI-ProteinID:
XP_050372365
LinkDB
All DBs
Position
1:complement(15824968..15836233)
Genome browser
AA seq
909 aa
AA seq
DB search
MSRSSGGGLRVLNVAEKPSVAKSVANILSRGQGLRMREGRSRYNKIYDFSYSVNGCAAQM
LFTSVTGHLMELEFEDRYRKWHSCDPALLFQAPVRKFVPEDKLDIKRTLEEEARTCQWLV
LWLDCDREGENIAFEVIDVCTSVNRHLTIKRARFSALIDRDIHHAMQNLDNANKHFADAV
DARQEIDLRIGASFTRFQTMLLRDAFVIDSAADDRNLVLSYGPCQFPTLGFIVERYWEIQ
SHEPEDFWTINCSHRSDEGTATFGWMRGHIFDHACAVIIYEMCVEEPLATVTKVRLQEKP
KYPPYPLNTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDGFSPRTDLHAIV
QEQQGHPGWGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSSGESGWSQDHNRLY
ELVVRHFLACVSQPAVGAETTVEIDIASEVFSASGRVILAKNYLDVYRFESWGGSLLPTY
AVGQQFMPTTLTLDSGITRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKD
ANTRFSPTNLGEALVMGYDDMGYKLWKPYLRALMERDMKAVSEGNKSKAEVLETCLQQMK
ACFLDARLNKVKLLEAMAVFFERSIRPGQDEHHASGEFIRQCGLCQEADMVLRKNRDGNF
MVGCMGYPQCRNAIWLPGSVSEAVATTNVCNSCTPGPVYLIQFTFRRLEIPPNYSTNHLG
CIGGCDEILRQLTEICGTGSRSAARGRGPAASSNVQRNNTRQGACIYCHQSGHSSGDCPS
QSVGPRSVRPRTMNAQNAGQISVSCTTCGAQCALRTANTTQNRGRKFYKCPSQECNFFVW
EDSVGNGSVGRGFQRATNVDGQSAARGRGAGRGTGGTFVSATGDPNSGRRCFVCGDPSHF
ANVCPNRGN
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagcagtggcggcggcctgagggtgctgaacgtggcggagaagccgtcggtg
gcgaagtcggtggccaacatactgtcccgcggccaaggactccgaatgagagagggccga
tctcgctacaacaaaatctacgacttcagctactccgtcaacggctgcgccgcccagatg
ctcttcacctccgtcaccggccacctcatggagctcgaattcgaagaccgctaccgcaag
tggcactcctgcgaccccgcgcttctcttccaggcccccgtccgcaagttcgtccctgag
gacaagttggatatcaaaaggacattagaggaggaagctaggacatgccagtggcttgta
ttgtggcttgactgtgacagagaaggggagaacattgcattcgaagttatagatgtctgc
acatctgtaaatcgtcatcttaccattaagagggctcgtttctcagcgttgattgacagg
gatatccatcacgcaatgcaaaatcttgacaatgcaaacaaacattttgctgatgcagtg
gatgctaggcaagaaatagatctacgaattggtgcttcatttaccaggtttcagaccatg
ctcctgagagatgcgtttgttattgattctgctgcggatgacagaaaccttgttctaagt
tatggtccttgtcagttccctacacttggttttattgtggaacgttattgggagatacag
tcacatgagccagaggatttttggaccattaactgttcacatagatcggatgaaggaact
gcaactttcggttggatgcgtggccatatttttgatcatgcttgtgctgtcataatctat
gaaatgtgcgttgaggagcctcttgcaactgtcacaaaggtcaggctacaggagaagccg
aagtatcctccatatcctttgaataccattgagcttgaaaagcgtgcctcaagatacttt
cgaatgagttctgaacatactatgaaggtagcagaagagctttaccaatctggtttcatc
agttatcctcgcacagagaccgatggcttctctccaaggaccgatctgcatgcaattgta
caagaacaacaagggcatcctggatggggatcatatgcacagcgattgttggaccctgct
tctgggctttggagaaaccctagtagtggtggacatgatgacaaggcccatccacctatt
cacccaaccaaattttcttctggagaatcgggatggagtcaagatcacaatcgactttat
gagctggttgttcgccattttctggcatgcgtctcacagccagctgtaggggccgaaact
actgttgagatagatattgctagtgaagtgttctctgcatctgggagagtgatactagcg
aaaaattacttagacgtgtatcgctttgaatcatggggaggttcgctgctacctacatat
gctgttggacaacagtttatgccaacaacgttgactcttgattcgggaatcactaggcct
ccaccacttttgagtgaagctgatttgctgggctgtatggacaaggagggtattggtaca
gatgcaacaatgcatgatcacattaaaaaactgcttgatcgtttttacgcaaccaaggat
gcaaatactcgtttctcaccaaccaatctgggtgaagcattggtgatgggatatgatgac
atggggtataaactttggaaaccctaccttagagctcttatggagcgtgacatgaaagca
gttagtgaaggtaataagagcaaagctgaagttttggaaacttgcttgcagcaaatgaaa
gcctgcttccttgatgctaggctgaataaagtaaaacttttggaagccatggcagtgttt
ttcgagagatcaattagacctggccaagatgagcaccatgcatctggagagtttattcgg
caatgtggactttgccaggaagcggatatggtgcttaggaagaatcgggatggaaatttt
atggtgggatgtatgggttatcctcagtgtaggaatgctatctggctccctggatctgta
tctgaagcagttgcaacgactaatgtttgcaactcatgcactccaggtcctgtttacttg
attcaatttacatttcggcggctggaaataccaccgaactatagtaccaaccatttgggt
tgcattggtgggtgtgatgagattcttcgacagttaacagaaatatgtggaactggttct
cggtcagcagcgagagggcgaggaccagcagcatctagcaatgttcaacgaaataatacc
aggcagggtgcttgcatatattgccaccaatcagggcattcttcaggcgattgcccttcc
caatctgtaggccctcgaagtgttaggccgcgaactatgaatgcacaaaatgcagggcaa
atatcagtctcatgtactacatgtggtgcacagtgtgctctacgaactgctaataccaca
cagaataggggaaggaaattctacaaatgcccatcgcaggagtgcaacttctttgtatgg
gaggatagtgttggcaatgggagcgtgggaagaggttttcagcgtgccacaaatgttgac
ggtcagagtgctgccaggggcagaggtgcaggacgtggtactggtggaacttttgtgtca
gcaactggtgatcctaattctggtagaaggtgttttgtttgtggagatccatcgcacttt
gcaaatgtctgcccaaaccgtggaaattga
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