Argentina anserina (silverweed cinquefoil): 126790503
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Entry
126790503 CDS
T10558
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126790503
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126790503
Surveillance factors
Other surveillance factors
126790503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_ATXR3
MavL
Motif
Other DBs
NCBI-GeneID:
126790503
NCBI-ProteinID:
XP_050372712
LinkDB
All DBs
Position
4:19957062..19964653
Genome browser
AA seq
1594 aa
AA seq
DB search
MADGKLDLPNDLLSSKPSDQSWTSKVQVSKANDEEKVHMGSADELKDPAALDSGIPLSPQ
WLYAKPIDSKLEMRGPTSLGNSTDSNQKEVWRSDGSEDKKDWRRPATESENSRRWREEER
ETSLLGGRRDRRKTERRADNIPLREATDSRTLPTTDRWSDGRNEVRRDSKWSSRWGPEEK
EKESRTEKRTDVEKDDVHSNIESQSLGANNRSAAERESDSRDKWRPRHRMEVQTGGLATY
RAAPGFGIEKGRVEGSNLGFALGRGRSSGIGRSAGTILSALSGKSDSVPGKPRRSVDDFR
YPRGKLLDIYRQRKPELSFDTMPEAMEESPPLTQVGFVKPLAFHAPDADEVAILSDIWKG
KITSSGVVYNSFRKGRSTENVTGVGDSEAADGVLGNLPPTVAQETNTYQEAANADDYGTL
WNYGSHRNMKNEKDVSHKESDNIGTEGKDFDGMPLSIPKSNGIFGDVGTGGSYDSANQLP
ACGSMKVKDSSSPNHPVSEDIEFANYSDVRSKLPDVSNTLYGLASSEQNDLRAKELEMDV
HPEGLSYFYLDPQGVTQGPYQGLDIISWFEQGFFGTDLLVRLEDAPEGTPFIELGDFMPH
LKSWDGNGSIINSSSNIEESGGLGGGSLPFTAAVSDSNYTFLGNDHQRPLWELDSYSAEH
IQPRISEPEAPLQLHSRGQSFNDFVEQDEDIVFPGINGTTAYSTARSSGSIHDPMANSMN
HLPPTNELTESGVPIQNDRLHPFGLLWSELESGQSKQSKLANMPSSKGGRGVPFSANPDP
ATTEMWSDHHRKNSVSDPNLYQEMLTPRQLSHMEQEPSHHDLAEQLMSQQIRQQQQQQLQ
QRNMLSSFAHMNDSVLDPMQSQNIIHHQQLANHSSADLEHLLALQRQAQLEQHQLQQQQQ
FHQQKLLQEQQQSQVQQVLFEQLLRGQMHDPTLRQPHVDPVRANNVIDQVLLEQQLLHEL
QQRSHHLPRHVDPTMAQLIQAKFGHTPQGHQTDLFELLSRAQHEQQSLEQQMHARQLPMG
LRQRMEEERHIGSIWPAEESNQIFRTHASNHDHRGHSSGFNPLDFHQRQQRASHEEQLNN
LERNLSLQDRLQQGFYEPGSLPFERSMSLPAGAPGMNLDVVNAMIRAQGLDMQDSIGRIP
SGQISSGIPSHNAHHPHVPNQFHVSHLDAIEGHWPEKNDQLESDWMDARFQQLHINAERQ
KRDSEIKNSSQDQNLWMSDGINEENSKRLLMELLHKKSGNQRSESLNVMSNGMLPDKSLP
SGQYSGSSSSNHLFNLHADQEAGLNNSFRVGSFGSNPGELPQEELASSVESNEKLMYRSN
SGALADRESFLAGINATCQSLYTQSNMIPKSSIGKEPSELDGRKWGSKSEGINMARSFEN
QERMIEQSGLLTTNNFKERSKNLHSMNASSGVSGGNASFYIDKIGRSNSFVEETAKDRVP
IPPKVQENILLRRPPVPSASASQEGLPEPTSDPVLRGKTSIAASDGARRDTVVSPVNQSS
DVMASSKKEMHFRRTSSASDADVSEASFIDMLKSNAKKIPPMDAQTTAGFAESSEGGRSG
KKKGKKGRQIDPSLLGFKVTSTRIMMGEIQRLDD
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcaagctcgatctccccaacgatctcctctcctccaagccctccgatcag
tcctggacctccaaagttcaagtttctaaagccaatgatgaggaaaaggtgcatatgggg
tcagctgatgagttgaaagatccagctgccttggatagcggcatacctttatcaccgcag
tggctttatgccaagccaattgactctaagttggaaatgcgtggtccaacttctctcgga
aactccactgatagcaaccagaaggaagtatggcggtcagatggttctgaggacaaaaaa
gattggaggcggcctgctactgagagtgaaaatagccgtcgttggcgggaagaggaaaga
gaaactagcttgcttggtggtagaagagatcgtaggaaaacggaacgccgtgctgacaac
attccattgagagaggcaactgatagtaggacattgcctacaactgataggtggagtgat
ggccgcaatgaagtacggcgtgatagcaaatggtcgtcaaggtggggtcctgaagagaaa
gaaaaggagtcccgaactgagaagagaaccgatgtggagaaggatgatgttcacagtaac
attgagagtcagtctcttggagctaataatcgttcagctgctgagcgtgagtcagattct
cgggataaatggaggccacgccatagaatggaggttcaaactggggggttggctacttac
cgtgctgcacctggatttggaatagaaaaaggacgagtggagggttcaaatttgggattt
gcccttgggcgaggaaggtcaagtggtattgggagatccgcaggtaccattttgtctgct
ctttcaggaaaaagtgatagtgtccctgggaaaccaaggcgctctgttgatgattttcgc
tacccaaggggaaagcttcttgacatttatcggcagcgaaagcctgaactatcttttgat
accatgccagaggcgatggaggagtcgcctccactaactcaagttgggtttgttaaacca
ttggcttttcatgcccctgatgctgatgaggtggccatccttagcgatatatggaaggga
aagataacaagtagtggggtagtatacaattcatttagaaagggaagatcaactgaaaat
gttacaggtgtgggagactcagaagctgctgatggagttctgggcaatttgcccccaact
gtcgctcaagagactaacacctatcaagaggctgcaaatgctgatgactatgggactttg
tggaattatggttcacacaggaatatgaaaaatgaaaaagatgttagtcataaagaaagt
gataacataggtactgaaggaaaggattttgatggaatgcccctatcaattccaaaaagt
aatggtatctttggtgatgtggggactggtggttcttatgatagtgcaaatcagcttcct
gcttgtggcagtatgaaagtcaaagattcttcctctcccaatcatcctgtatctgaggac
attgagtttgccaattattctgatgtaagatccaagcttcccgatgtttcaaatactctc
tatggtttggcctcttctgagcagaatgaccttagagcaaaagagttagaaatggatgtt
catcctgagggtttgtcgtacttctaccttgatcctcaaggggtgacccaggggccatat
cagggtttagacatcatttcatggtttgaacaaggtttctttgggacagacttgcttgtt
cgtttggaggatgctcctgaaggaacacctttcatagagttgggagactttatgccacat
cttaaatcttgggatggaaatggtagcatcataaattcaagttctaatatagaagaatct
ggtggcttaggaggaggcagtttaccctttactgcagcagtttcagacagtaattataca
tttttgggaaatgaccatcagcggcccttgtgggaattagacagctattcagctgagcat
attcagccaagaatttctgagcctgaagctccattacaactacattcaaggggtcaaagc
tttaatgattttgttgaacaagatgaagatattgtgtttcctggaattaatggaaccact
gcctattctactgcacgttcttctgggagcattcatgatcctatggcaaactctatgaat
caccttcctcccacaaatgaattgacagaatctggtgtgcctattcagaatgataggttg
catccctttgggttgctatggtctgagctagaaagtggccaatcaaagcaatccaagttg
gccaatatgccatctagtaagggggggaggggagttccatttagtgcaaatcctgatcca
gcaactactgagatgtggtctgatcatcatagaaaaaattcagtctctgatccaaacttg
tatcaggaaatgttaactcctcgccaattgtcgcacatggaacaggaacccagtcatcac
gatttagcagagcagcttatgtcgcagcaaattcgacagcagcagcaacagcagctccaa
cagcgaaatatgttgtctagttttgcacacatgaatgatagtgtattagatcctatgcaa
agtcagaatattattcaccatcaacaattagccaaccattcttcagcagatctggaacac
cttttggcactacagaggcaggcccagcttgaacaacatcaactgcaacagcagcagcag
ttccatcagcagaagctcttacaggagcaacagcaatctcaagtacaacaggtgcttttt
gaacagttgctgcgtggtcaaatgcatgatcctacacttaggcagccacatgttgatcct
gtaagagcgaacaatgttattgatcaggttttattagagcagcagctcctacatgaactc
cagcaacggtctcaccatcttccgagacatgttgatcctactatggcgcagttgattcaa
gcaaaatttggtcatacacctcaaggacatcaaacagatttgtttgagctgctgtctcgt
gcacagcatgaacaacagtcactggaacaacagatgcatgcaaggcaattacctatggga
ttgaggcagcggatggaagaagagaggcatatcggttctatatggccagccgaggaatca
aatcagatcttcagaacccatgctagtaatcatgatcacagagggcactcttctggcttt
aatcctttggattttcatcagaggcagcagagggcatctcatgaggagcagttgaataac
ctggagcggaatctttcattacaggaccgacttcagcaagggttctatgagcctggttca
ctgccctttgagcggtcaatgtcattacctgctggtgcaccagggatgaacttggatgtg
gtaaatgctatgattcgtgcccaaggtttagacatgcaggattccattgggcgtataccg
tcgggtcaaatttcttctggaatcccttcccacaatgctcatcatcctcatgttcctaac
caatttcatgtttcacatttggatgcaatagagggacactggcccgagaagaatgatcag
cttgagagtgactggatggacgctcggtttcagcagctgcatattaatgctgagaggcag
aaaagggattcagagatcaagaattcttctcaggatcaaaacttatggatgtcagatgga
atcaatgaggagaactcgaagagactattgatggagctactccataaaaaatctggcaat
caacgtagcgagtcgttgaatgtgatgagcaatgggatgttgcctgataaaagtctgcca
tctggccagtactctggatcaagctcctcaaaccacctgttcaatcttcatgcagaccaa
gaagcaggtctaaataactcatttcgtgtagggtcatttggttccaatccgggtgaactc
ccacaggaggagctggccagcagtgtggaaagcaatgagaaattgatgtatagatctaat
tctggagcattggctgatagagagtcatttctggcaggaattaatgcaacgtgccagtca
ctttacacacaatctaacatgatacctaagtcttctataggtaaagaaccttctgagttg
gacggcaggaagtggggttccaaaagtgaggggataaatatggctcgatcttttgagaat
caagaacgaatgattgaacaatcagggttgttgacaacaaataattttaaggagaggtca
aaaaacttgcatagcatgaatgcttcctcaggtgtttcaggtgggaatgctagtttttat
attgacaaaattggccgaagtaattcatttgttgaagaaactgccaaggatcgggttcca
attccacccaaagtgcaagaaaatattctgctcagacggcctcctgtcccaagtgcttca
gcatcacaagaaggtttaccagaacctacttccgatccagttcttagaggaaaaacttca
attgctgcttcagatggggcaaggcgagacacagtggttagtccagtaaaccaaagttct
gatgttatggcatcttcaaaaaaagaaatgcattttcgccgtacatcatctgccagtgat
gctgatgtatcagaggcttcatttattgatatgcttaagagcaatgccaagaagattcct
ccgatggatgcccaaacgacagctggatttgcagaatcatcagaaggtggccggagtggc
aaaaagaaaggaaagaaagggaggcaaattgatccttccctccttggttttaaagtcacc
agcactcgtataatgatgggtgaaattcagcgactcgatgattag
DBGET
integrated database retrieval system
