KEGG   Argentina anserina (silverweed cinquefoil): 126791270
Entry
126791270         CDS       T10558                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1-like
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
aans  Argentina anserina (silverweed cinquefoil)
Pathway
aans03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aans00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126791270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aans03021]
    126791270
Enzymes [BR:aans01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     126791270
Transcription machinery [BR:aans03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     126791270
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 126791270
NCBI-ProteinID: XP_050373657
LinkDB
Position
4:complement(896367..908896)
AA seq 1919 aa
MEEASCSPVLDGELIGIKFGLATHKEICTASMMGCSVSHASQLSNPFLGLPLEFGKCESC
GASETGKCEGHFGYIDLPSPIYHPNHVSELKKLLSCLCLQCLKIKKNKVSTKSAGLAERL
LSVCCEDASQVSIAEIKPTDEVCSLQLKLPTNKKPPPGFWNFLERYGFRYGDGVKRALLP
REVMQILKRIPEDTKRKLAAKGFNPQDGYILNHIPVPPNCLSVPEISDGVTVMSADPSIS
MLKKVLKEAEDISRSRSGPANFVTEIEEANRLQAAVDQYLQVRGTGKATRESDVRFGGTK
ELSESSTKQWLEKMRTLFIRKGSGFSSRTVITGDAYRRVNEVGIPYEIAQRITFEEKVNV
HNIRRLQELVDKKLCLTYVDGSSTYSLREGSKGHTFLRPGQVVHRRIIDGDLVFVNRPPT
THKHSLQALQVYVHEDKVVKINPLICGPLSADFDGDCIHLFYPQSFAAKAEVMELFSVEK
QLLSSHSGKPNLQLATDSLLSLKMMFKKYFFNKEAMQQLAMFVSSSLPEPALLRANSAVP
CWTALQILQAALPPHFESSGDRHLVKDSEVLKLDCTTSLVPAVINDIGTSIFFEKSAEDV
LNFFNSMQPLLVENIFSEGFSVGLEDFAMPKVSIRDIHKGFKDISPLLYHMRRVYNELVE
MQLENLIRKVKGPVSNFILNSSALGDLIDSKSDSAMNKVVQQVGFLGRQLYEQGKLYSKT
LVEDVSSLHKSKYPSNIVDXSAEFGLVHSGFVHGLDPVEGMIHSIATREVIVRSSKGLFE
PGTLFKNLMATLRDVVICYDGTVRNVCSNSIVQFEYGAKSGSSPQNLFPAGEPVGVLAAT
AMSNPAYKAVLDSTPSSNSSWDLMKEILLCKVSFKNELIDRRVILYLNDCGCGRKYCREH
AAYLVKNQLKKVSLKDVALDFMIEYQGQRAAGSMEIDSGLVGHVHLNEMLIRELNLGMNE
ILQKCEESISSFRRKKVGKKTNIGDIFKRIVLSYSECCCFYQSSAGNGSGSPCLMFFYQD
FNNSELEAISQILADFVCPVLLETVIKGDPRVSSANIIWINSESTTWIRSPNKSLKGELA
LDVVLEKSVVKQSGDAWRITLDCCLPVLHLIDTRRSIPYAIKQVQKLLGVSCAFDQAVQR
LATAVAMVAKGVLKEHLILLANSMTCAGNFVGFNPGGYKALSRALNIQVPFTEATLFTPK
KCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDTREGGFNEEGGVDVFNFLH
MVNAVNGEELTTAALGTEIDDLVPEYENGEVSLSPEHNCSSDKPVFEDIIEFPDNFENAF
GKSSWDSINTASTGGKDWGAVNLGTQDGISAESQVDTMSSWGIKTAREEAPSSWGTAKSA
TEDASAWGTKTKENAPSQLKTKTAWGKNTAREDDTEIAEGAWGQKKLADNSSLGAWGRQK
SPEIAECAWGLKKPADTSSLGAWGRQKSPEIAEGSWGQKPADTSSRPKSPEIAEGAWDQR
KPSGTSSLGAWGRKKSPEISEGAWGQKPADTSSRQKSREIAEGAWDQRKPSGTSSLGAWG
MKKSPEISEGACGQKKPVDTSSLGAWGRQKSPEIAEGAWGQKPADTSSRQKSPEIAEGAW
DQQKPSGTSSLETWGRQKSPEISEGAWGQKKPAGTSSLGAWWGRQKSPEIVEGAWCQKKP
AETSWQKSPEIAEGAWGQQKPAGTFQPATVNQWDSPSVGDGNADERHQVWATNGDANKRR
RFEGGRGWGSNAGEWKGKNNRPPGMADDGSSAAAIYTTTRQRLDTFTSEEQDVLSHIEPI
MLSVRRIMHQSGYNDGDRFSDEDHTYILDKVFNFHPDKAVKMGSGIDYFTVDRHGSYQES
RCLFVISTDGRKEDFSYRKCLQNMVKEKYPELAEEFNAQYFVKPRSRNPSFSQTPPETQ
NT seq 5760 nt   +upstreamnt  +downstreamnt
atggaggaagcttcttgttcaccggttttagatggggagctgattgggattaaatttggg
ttggcaacccataaagaaatttgtacagcatcgatgatgggatgctctgttagccacgcc
agtcagctatctaacccattccttggccttcctcttgagttcggaaaatgtgaatcttgt
ggtgcttcagaaacgggaaagtgcgaaggacactttggatatatcgacttaccatcacca
atatatcatcctaaccatgtcagtgagctgaagaagttgctgagttgtttatgcctacaa
tgcttaaaaattaagaagaacaaggtctcaaccaagagtgctggtctggccgaaaggttg
ctatctgtatgttgtgaggatgcatcacaagtttctattgcagagattaaaccaacagat
gaggtttgttccttgcaactgaaactaccaactaataagaaaccaccgcctggtttttgg
aatttccttgaaagatatggttttcgttacggtgatggcgttaaacgtgctttacttcct
agagaggtgatgcagattctcaagagaatccccgaagacaccaagagaaaactggctgct
aaaggctttaatcctcaagatggatacatcttgaatcatatacctgtccctccgaactgc
ttgtcagtgcctgaaatatctgatggtgttactgttatgtctgcggatccttcaatatca
atgctaaaaaaagttctaaaagaagctgaagatatcagtaggtcaaggtctggtccagca
aattttgtcactgaaattgaggaagctaataggctgcaagcagcagttgatcagtatctt
caagtgaggggtacaggaaaggccacacgtgagagtgatgtcagatttggtgggaccaag
gagctcagtgaatcttcgacaaaacaatggcttgaaaagatgaggacattgtttataaga
aagggttcaggattctcttcccgcacggtgattacgggggatgcatatagaagggtgaat
gaagttgggatcccctatgaaatagcccagagaataacttttgaggagaaggttaatgtg
cataatattaggcgtcttcaagagctggtagataagaaattatgcctaacgtacgtcgat
ggttcatcaacttactcgttaagagaaggttcaaaggggcacacatttctgaggcccggt
caagtggtgcataggaggataattgatggggatcttgtttttgtcaataggcctcccacg
acacataaacattctctgcaagcattgcaagtttatgtgcatgaggacaaggtggtaaag
attaatcctctgatttgtggaccactgagtgctgactttgatggagattgcattcacttg
ttctatccccagtcttttgcagcgaaggcagaagtgatggaacttttctcagtagagaaa
caattgcttagctctcacagtggcaagcccaatttgcaactggccactgactctcttttg
tcgttaaagatgatgtttaagaaatattttttcaacaaagaagcaatgcagcagttggcc
atgtttgtttcgtcctccttgccagagccagctttattgagagctaattcggcagttccg
tgttggactgctttgcagatattgcaggctgcactgcctcctcactttgagtcctctggg
gacaggcacttggtcaaggatagcgaggtcctcaagcttgattgtactacaagccttgta
ccagctgttatcaatgacattggtacctctatcttcttcgagaaaagtgctgaagatgtt
ctcaatttctttaattctatgcagccattgctagtggagaatatattttcagaagggttc
agtgtgggtttggaagattttgctatgcctaaggtatctatacgagacattcacaagggc
tttaaggatatttctcctttgttgtaccatatgaggagagtatacaacgagcttgttgag
atgcaattggagaatctcatccgaaaagttaaaggaccagtttcgaactttatattaaat
tcatcggcattgggtgatttaattgactctaagagtgattctgctatgaacaaagtggtt
caacaagttgggttcctaggccggcaactgtatgaacaggggaaactttactcaaaaaca
ttggttgaggatgtgagctcactgcataagagcaagtatccatctaacattgtggatnac
tctgcagaatttggattggttcatagtggttttgttcatgggttggatccggttgaggga
atgattcattccattgctacaagagaagtaattgttcgctcctcaaaagggttgtttgaa
cccggcacactattcaaaaacctaatggcaactctgcgggatgttgtcatttgctacgat
ggcaccgtgcggaatgtgtgcagtaattctattgttcagtttgaatatggagcaaagagc
ggatctagtcctcaaaatctgtttcctgctggtgaacctgtgggtgtgttagctgcaaca
gcaatgtcaaatccagcatacaaggcagttcttgattctactccaagcagcaactcttca
tgggatcttatgaaggaaatattactctgcaaagtcagtttcaagaatgaactcattgac
cgtcgtgtaatcttgtatctgaatgactgtggttgtggaagaaagtactgcagagaacat
gcggcgtatttggtcaagaatcaattgaaaaaagtcagccttaaagatgttgcactcgac
tttatgattgaatatcaaggtcagcgagctgcaggaagcatggaaattgactctggcctt
gttggtcatgttcatttgaatgagatgctcatacgggagctaaatcttggaatgaatgaa
atccttcaaaaatgcgaagaaagtatcagttcatttcgaagaaagaaggttgggaagaag
acgaacatcggcgacattttcaaaagaatagttttgtcgtacagtgagtgttgctgtttt
tatcaatcttctgctggcaatggatctggatctccttgcttgatgttcttctaccaagat
ttcaataattcagagttagaggctatttcacaaatcttggctgattttgtttgcccagtt
ctattagaaacagtaattaaaggtgatcctcgagtttcatcagcgaacataatttggatc
aattcagaatcaacaacatggatcagaagcccaaacaaatctctgaagggtgaattggct
ttggatgttgttctggagaagtcggtggtcaaacaaagtggcgatgcgtggagaataacc
cttgattgctgtcttccagtgcttcatttgattgacaccaggcgctccattccatatgcc
atcaaacaagttcagaaattgctgggggtttcttgtgcttttgatcaagcagttcagcgc
ctcgcaacagctgttgcaatggtggcaaaaggtgttctcaaagagcatcttattctcttg
gcaaacagtatgacatgcgctggaaattttgttggcttcaatcccggtggttataaagca
ctatctcgcgcattgaatatacaagtaccatttacagaagcaacattgtttacaccaaag
aaatgttttgagagagcagctgaaaagtgtcacatggattctttgtcgagcatagttgca
tcatgttcgtggggtaaacatgtagctgttggtactggctccaggttcgaaatcctctgg
gacacaagagagggagggtttaatgaagagggtggggtagatgttttcaactttctacat
atggtgaatgctgtgaatggagaagaattaactactgcagctttgggaacagaaattgat
gatcttgtgccagaatatgaaaatggagaagtgtcattgtcaccagagcataactgtagc
tctgataagccagtgtttgaagatattattgagttcccggataattttgaaaatgctttt
ggaaaatcaagctgggattcaatcaacaccgcttctactggtgggaaagactggggggct
gtcaaccttggaacacaagatggcatttcagcagaatcccaagttgataccatgtcttca
tgggggattaagactgctagagaggaggctccatcttcctggggaacagccaaatcggca
acagaagatgcctctgcatgggggaccaagactaaagaaaatgccccatcacagttgaag
accaagactgcttgggggaaaaatactgcaagagaagatgatactgagattgctgaaggt
gcatggggtcagaagaagcttgctgataactcatctctgggagcttggggaaggcaaaag
tcccctgagattgctgaatgtgcttggggtctgaagaagcctgctgatacctcatctctc
ggagcttggggaaggcaaaagtcccctgagattgctgaaggttcctggggtcagaagcct
gctgatacatcatcaaggccaaagtcacctgagattgctgaaggtgcttgggatcagcga
aagccttctggaacttcatctctgggagcttggggaaggaaaaagtctcctgagatttct
gaaggtgcttggggtcagaagcctgctgatacatcatcaaggcaaaagtcacgtgagatt
gctgaaggtgcttgggatcagcgaaagccttctggaacttcatctctgggagcttgggga
atgaaaaagtctcctgagatttctgaaggtgcttgcggtcagaagaagcctgttgatacc
tcatctctcggagcttggggaaggcaaaagtcccctgagattgctgaaggtgcctggggt
cagaagcctgctgatacatcatcaaggcaaaagtcaccagagattgctgaaggtgcttgg
gatcagcaaaaaccttctggaacttcatctctggaaacttggggaaggcaaaagtctcct
gagatttctgaaggtgcttggggtcagaagaagcctgctggtacctcatctctcggagct
tggtggggaaggcaaaagtcccctgagattgttgagggtgcttggtgtcagaagaagcct
gctgaaacctcatggcaaaagtcacctgagatcgctgaaggtgcttggggtcagcaaaag
cctgctggtacttttcaacctgcaactgtgaatcagtgggattctccaagtgtaggagat
ggaaatgcggatgaaagacatcaagtatgggctactaatggagatgcaaacaagagaaga
cgctttgaaggtggcaggggctggggttcaaatgctggggagtggaagggtaagaacaat
cgccctcctggaatggcggatgatggctccagtgcggctgcaatatacaccacaacgcgc
cagagattagataccttcacttctgaggagcaggatgttctttcccatattgagccgatt
atgctctctgttcgaagaataatgcatcaatccgggtataatgatggagatcgattttca
gatgaggatcatacatacatccttgataaagtattcaatttccaccctgataaagctgtg
aagatgggctctgggatcgactattttacggttgatagacatggaagctatcaagaaagc
cgatgcctttttgttatatcaactgatggccgcaaggaggacttttcctacaggaaatgc
ctgcaaaatatggtaaaggaaaagtatcctgaacttgctgaagaattcaatgcccagtat
ttcgtcaagccccgatcccggaatcccagtttcagtcagacccctccggagacacagtag

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