Argentina anserina (silverweed cinquefoil): 126791728
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Entry
126791728 CDS
T10558
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126791728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126791728
03041 Spliceosome [BR:
aans03041
]
126791728
03036 Chromosome and associated proteins [BR:
aans03036
]
126791728
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126791728
Spliceosome [BR:
aans03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126791728
Complex B
126791728
Complex C
U2 SnRNP specific factors
126791728
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
126791728
TFTC complex
126791728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
126791728
NCBI-ProteinID:
XP_050374157
LinkDB
All DBs
Position
1:complement(21526343..21530892)
Genome browser
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQRATGIVCAINGNFSGGKTQEIVVARGKVLDLIRPDDNGKIQTLLSVEAFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMVGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNPI
FAAIELDYSEVDQDSSGTAQREAQKHLTLYELDLGLNHVSRKWSDQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGQPDVRAVIPRRDDLPAERGVLVVSAATHKQKSMFFFLLQ
TEYGDMFKVTLEHNNDIVSELKIKYFDTIPVTTSICVLKSGFLFAASEFGNHSLYQFQAI
GEDPDVESSSATLMETEEGFQPVYFKPRKLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNVSDEFDAYIVVSFANAT
LVLSIGETVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGRK
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSIPESLLFLEVQASVGGEDGADHPANLFL
NAGLQTGILFRTVVDMVTGQLSDSRSRFLGLRAPKLFSISIRGKHAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFASDQCAEGVVAVAGSALRVFTIERLGETFNETVIPLRYTP
RKFVVQVKRKLLVIIESDQGAFTAEEREADKKECFEAAELGENGNGNVEHMENGDNEDDP
LSDEHYGYPKAESGKWASCIRVLDPKTATTTCLLELLDNEAAFSVCTVNFHDKEYGTLLA
VGTAKGLQFWPKKSITAGYIHIYRFLDDGKSLELLHKTQVDGVPLALCQFQGRLLAGIGS
VLRLYDLGKKRLLRKCENKLFPNNIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFA
DDCVPRWLTASFHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGA
PNKVEEIVQFHVGDVVSCLQKASLIPGGGECIIYGTVMGSLGALLAFTSRDDVDFFSHLE
MYMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctcactctccagcgcgcgaccggcatagtctgcgccatcaacggc
aacttctccggcggaaagacgcaagaaatcgtggtggccagaggcaaggtgctcgacctc
atccgccccgacgacaacgggaagatccaaaccctcctctccgtcgaagccttcggcgcc
attaggtccctggctcagtttaggctcaccggctcccagaaagactacatcgtagtcggc
tccgattcgggccgcattgtaattctcgagtacaacaaggagaaaaacgtctttgacaag
atccaccaggagacgtttggtaaatccggatgcaggaggatagtgccgggtcagtacttg
gctatcgacccgaaagggcgggccgttatggtcggtgcctgtgagaagcagaagctagtt
tatgttttgaacagggacaccgctgccaggttgaccatatcgtcgccgctggaggctcat
aagtcgcatacgatagtgtattccatctgcggagtcgactgtgggtttgacaatccgatc
ttcgctgccattgagttggattactcagaggtggatcaagattcgagtgggaccgcccag
agggaggcgcagaagcatttgaccttgtacgagctggatttggggcttaaccatgtgtca
aggaagtggtctgaccaggtcgataatggtgccaatctgctggtgactgttcctggaggt
ggggatgggccgagcggtgtgttggtctgtgcggagaattttgtgatttataagaaccag
gggcagccggacgtgagggctgtgattccgaggcgtgacgatttgcctgcggagcgtggg
gttcttgtagtctcggcagccactcacaagcagaagtccatgttcttctttcttttgcag
accgagtatggagacatgttcaaggtcactttggagcataacaatgatatcgtctccgag
ttgaagatcaagtactttgatacgattccggttacaacttcaatctgtgtgttgaaatcg
ggatttttgtttgctgcttcggagtttgggaaccactctttgtaccaattccaggcaata
ggtgaagatcctgatgttgagtcttcctcggctactttgatggagactgaagagggtttc
cagccggtctatttcaagcctagaaagctgaagaacctcgtgaggattgatcaggttgag
agcttgatgccgataatggatatgaaggtttctaatctcttcgaagaagaaacacctcaa
atatttacactttgtgggcgtggtcctcgttcatccctcaggatactaagacctggtttg
gctattagtgaaatggctgtgtccgagcttcctggcgtgccgagtgcagtttggacggtg
aaaaagaatgtgagtgatgagtttgatgcatacattgtggtgtcattcgctaatgctact
cttgtgctttccattggtgagacagtcgaggaagttaatgacagtgggtttcttgatact
accccgtcacttgcagtgtctttgataggtgatgattctctcatgcaagttcacccaaat
ggcattaggcatattagggaagacgggcgtatcaatgaatggagaactcctggaaggaaa
accattgtcaaggtcggttctaacagacttcaggttgtaattgctctgagtggaggggaa
cttatatactttgaggtcgatatgactggtcaattaatggaggttgagaagcatgaaatg
tctggagatgtagcttgtctggacattgccccagtacctgaagggagacagagatctcgt
ttccttgcggttggctcatatgacaacacaattcgtatcttgtcattggatcctgatgac
tgtatgcagattctgagtgtccaaagtgtttcttcaattccagaatctctcctgtttctt
gaggttcaggcatcagttggtggtgaggatggtgctgatcatccagccaaccttttcctt
aatgccggtttacaaactggaattttgttcagaacagtcgtggatatggtgacaggtcag
ctttctgattcccgctctcgattcttaggactgagagctccaaagctattttctattagc
ataagaggcaagcatgccatgctttgtttgtcaagtcgcccctggcttggttatatccat
caaggacatttcctgttaactcccctatcatatgagactcttgaatatgcggcttcattt
gcatctgatcaatgcgcggaaggtgtagtcgctgttgctggcagtgctttaagggttttt
accattgaaagactgggagaaacatttaatgaaactgtgattcctctgaggtacacccct
agaaagtttgtggttcaagtgaaacgaaagcttttggttattattgaaagtgatcaagga
gcattcacagcagaagagcgtgaagctgataaaaaggagtgctttgaggctgcagaacta
ggtgaaaacggtaatggtaatgttgagcatatggaaaatggtgataatgaggatgatccc
ctctccgatgagcactatggctatcccaaggcagagtctggcaaatgggcttcttgcatt
cgagttcttgacccaaagacagcaaccacgacttgtttgctcgagcttctggataacgag
gccgccttcagtgtgtgcactgtgaattttcatgataaggagtatggtacacttttggcc
gttggtactgctaagggacttcagttctggcccaaaaaaagtattactgctggatatatt
cacatatatcggtttctagatgatgggaagtcccttgaacttttgcacaagacacaagtg
gatggtgtccctcttgctttgtgtcagtttcaaggaaggttactcgctgggataggatca
gtgctcaggctatatgatttgggaaagaaaagattgcttagaaaatgtgagaataagctg
tttccgaacaatatcgtatccattcaaacctatcgtgatcgaatttacgttggtgacatt
caagagtcattccactactgcaagtataggcgggatgagaatcagctatacatatttgcc
gatgattgtgttccaagatggcttacagcatcatttcatatagactttgacaccatggcg
ggtgcagacaagtttggaaatgtgtattttgtgaggttgccacaggatgtttcagatgag
atagaagaagatccaacaggtgggaggataaaatgggagcaaggaaagttgaatggtgct
cccaacaaagtcgaggagatagtgcaatttcatgttggtgatgtggtcagctgcttgcag
aaggcatctctcattccaggtggtggtgagtgtatcatttatgggacagtgatgggtagt
ttgggtgcattgcttgcattcacctctcgtgatgatgttgacttcttctctcacctggag
atgtatatgagacaagaacatccccccttgtgtggaagagatcacatggcttacagatca
gcttatttcccggttaaggatgttatcgatggagatctatgtgagcagtacccaactttg
cctatggatctacagaggaaaattgcagacgagttggacagaactcctggagagatactg
aagaaacttgaggaaattcgaaataagatcatctaa
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integrated database retrieval system
